Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1163 ATGGCCAACCCAAATCACTATTACCATAGTTACCTTATAATGATTTTTTGTGTTGCTGTGTTGTTAACAGCTCAGATTCGAGGAAGCGACGATGAGGCAGGGTTGTCACTCCTTGGAGGGAAGAAGTTGATAATTGCTGTTCCTAAGAAACCGTACTTCATCCAATTTGTGGATACACAACTGAATCCTTTGAACAAGACACAGCTCGTGAATGTTACTGGCTATTGTATTGACATTTTCTTGGCTTCCATAGCTTACCTTCAGCGCTCAAATTACAATATTTCTTTTGAGTTTCGTGCTTTTGTGGACAATAATGGAAACACTATTGGGGGTTACGAAGCTCTCGTCTACCAGGTTCACCAAGGAAAGTACGATGCTGCAGTGGCAGATTTGACGATTGTGGCAAATAGGTCAAACTTCGTAGATTTTACATTGCCATATGCACAGTCTGATGTGAGGATGCTTGTGAAAGTTCAACACGGTCATCGCTTGAACATGTGGATTTTTGTACGGCCGTTTAGCTGGGACATGTGGTTGTGCATTGTCTTGGTCTTTATTTTTACAGGGGCTGTCATACTATTCATGGAACGCAATGTCAATAATATGGAAGATTCAACACTTAAAAAGTCTCGCATTAAGAAACAACTTAGTGGGATTTCTATCCTCTGGTTTCCCATAGTGCAAGCAGTTTTTCCCGAAAGAAAATCATTGGCCAAGAATTGCTCTAGGTTTGTGCTTGTGTTGTGGTTGATTCTAGTATTTGTACTAATGCAAAGCTACTCAGCATCCTTGTCTTCGATTTTGACCGTACATCAGCTCCAATCTCGTTACCCTAGTGAGTATGAAATTAGAACAGACCCCAACATTTATGTAGGATACCACTATGGCTCATTCATCGACGGCTTATTGGTTGATAGCGTGAAGGTTGATAGGTCAAGGTTGAAGGATTATTGTGGCATCAAGCAATATAAGGAGGCTTTAGATAAAGGAAGCCGTAATGGTGGTGTGGATGCCATTTTTGATGAAGTTCCTTACATTAAAGTCTTCCTTAAGGAATATGGTTCCAATTATGCCATGGTAGGGCCTAGGCATCGCACCGGTGGACTTGGCTTTGCATTTAGTAAGAATTCCACCCTAACCTCGCACTTTTCTCAAGCCATACTAAATGTAAGTGAGAGCTATGTAATGGACGAGATTGAGGAGAGATATTTTAAAGGTCATGAAGATGAAGATGGCATGTCTACTCCAACAACGTTAGATGGTGATAGTGACAGCCTCACCACATATAGCTTTGCAGGGTTGTTTGTGGTATTTGGAATTCTTTCACTGTTAGCCTTGTTAGTCTCCGAACAGCGTATCTGGAGAAGACAATTTATGCTTACGAACATGTCTAGCAAAAGATTCTTGCGCTGTCGGAGTTCTTCGGTAACTAATATTTCAGAAGAAGGTTCTACAGCAACAAGAATAAATGTTGATGATGATGATGGAGGAGGTCCTAGAAGCAGGGAAAATATTGGATCAGGACGACATGCAGAATATAACCACGCAAGGATATTAGTGGCATCTCTTCCCTAA 1575 0.4114 MANPNHYYHSYLIMIFCVAVLLTAQIRGSDDEAGLSLLGGKKLIIAVPKKPYFIQFVDTQLNPLNKTQLVNVTGYCIDIFLASIAYLQRSNYNISFEFRAFVDNNGNTIGGYEALVYQVHQGKYDAAVADLTIVANRSNFVDFTLPYAQSDVRMLVKVQHGHRLNMWIFVRPFSWDMWLCIVLVFIFTGAVILFMERNVNNMEDSTLKKSRIKKQLSGISILWFPIVQAVFPERKSLAKNCSRFVLVLWLILVFVLMQSYSASLSSILTVHQLQSRYPSEYEIRTDPNIYVGYHYGSFIDGLLVDSVKVDRSRLKDYCGIKQYKEALDKGSRNGGVDAIFDEVPYIKVFLKEYGSNYAMVGPRHRTGGLGFAFSKNSTLTSHFSQAILNVSESYVMDEIEERYFKGHEDEDGMSTPTTLDGDSDSLTTYSFAGLFVVFGILSLLALLVSEQRIWRRQFMLTNMSSKRFLRCRSSSVTNISEEGSTATRINVDDDDGGGPRSRENIGSGRHAEYNHARILVASLP 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1163 524 MobiDBLite consensus disorder prediction 482 507 - -
Acco13g1163 524 SUPERFAMILY Periplasmic binding protein-like II 21 405 - -
Acco13g1163 524 CDD GluR_Plant 41 404 - -
Acco13g1163 524 Gene3D - 321 368 - -
Acco13g1163 524 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 456 IPR015683 -
Acco13g1163 524 Pfam Ligand-gated ion channel 406 440 IPR001320 GO:0015276|GO:0016020
Acco13g1163 524 Gene3D - 36 167 - -
Acco13g1163 524 MobiDBLite consensus disorder prediction 487 507 - -
Acco13g1163 524 Gene3D - 168 288 - -
Acco13g1163 524 SMART GluR_14 42 406 IPR001320 GO:0015276|GO:0016020
Acco13g1163 524 Pfam Bacterial extracellular solute-binding proteins, family 3 111 405 IPR001638 -
Acco13g1163 524 Gene3D - 369 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1163 Acco-ChrAcco13 9763390 9767722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1163 40 448 Ion Channels AT2G29120 38.780 1.01e-73 249