Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1162 ATGGCTAAGTTCTTACAGAAGTGCCTTCTCTTTTGGATTCTTATGCAGCTTCGTCTGCTACAAAACTCCCAAACTGTGAGTGGCGAGTCGTCACCTAATTTGATCATGAGAATTGGAGTACCAAAGAAAGACGGTTTCACTCAATTTGTGAACTTACGTTGGCAATCTCGTCAAAATAAGTACGAAGTCTCTGGAGGGTATTGCATAGATGTCTTCAATGCCGTAATAAAGCAATTACCTTTCAAGGTTTCTCCTCAGTTTACTCCCTTCGTCAATCAAACAGGACAAAGTGCAGGCACATACGATTCACTCGTCCAACAAATCCCTCAAAAGTACGATGCTGTAGTTGGAGACGTGACGATCGTGGCAAACCGTTCAAGTTGGGACTTGTGGCTTAGCATAGCCATCGCCTCTATCTTCATTGGTTTTGTCATATCAATTATGGAACGAAATGTGAACAATTTGCCTGAGAGTGGATCCCAAACTTCAACCAAACAGCTCAACGTAGTCACCATTCTTTGGTTTCCACTATTACAGGCCGTACTTCCTGATCGAGAGGTTGTAGTGAAGAGCTGCTCGAGATTTGTGTTAATGCTACAACCTAGTTTTTTGAATGTGAACGATCTTAGAAATGGGAATTATTATGTTGGCTATCAAGCAAACTCTTTTGTGAGGGATCTTTTAGTGCAAAGGTTAAATCTTAATCCCTCCAAGCTAAGGGCTTACAGTAACCTTTCAGAATATCACCATGCTTTAGCAAAAGGAAGCCAAGGAGGTGGTGTCGCAGCCATATTTGATGAAATCCCTTTTCTTAAACTTTACCTCAATAAATATGGATCCAACAACTACATGATGGCTGGATCAACCTATCGAACAGATGGTTTTGGCTTTGCATTCTCGATTGGCTCTAATTTAACCTCTCACTTTTCAAGAGCTATCTTGAATGTGACTAAGAGTGATATAATGGATCGTATTCAGAAAAAGTATTTTGGGGAAGATGATAGTGGAGGAGTGCGAGATCAAACTGGGCAAGTGTCGTCGTCATCAACGAGTACGAGCCTCACTTTTCATAGCTTTCAAGGGCTTTTCTTGGTCACAGGAATCGTTACAGTAATGGCGCTGATAGTTTCAGAAAGTATTATTTGGCAAAAACCCATTTCAATGGTTAGAGCTTATAGTGAGAAGTATTTGTTCCGCAGTAATGGTACTCTACGTTCCAGAGATAACAGCGTTCATCTGGCTAAGGCTGATTCTCCAACTGAAATAAATATTTCAGCTTCAAATTCGCCAGAGATGGAAACACACGATGGTTAA 1314 0.4094 MAKFLQKCLLFWILMQLRLLQNSQTVSGESSPNLIMRIGVPKKDGFTQFVNLRWQSRQNKYEVSGGYCIDVFNAVIKQLPFKVSPQFTPFVNQTGQSAGTYDSLVQQIPQKYDAVVGDVTIVANRSSWDLWLSIAIASIFIGFVISIMERNVNNLPESGSQTSTKQLNVVTILWFPLLQAVLPDREVVVKSCSRFVLMLQPSFLNVNDLRNGNYYVGYQANSFVRDLLVQRLNLNPSKLRAYSNLSEYHHALAKGSQGGGVAAIFDEIPFLKLYLNKYGSNNYMMAGSTYRTDGFGFAFSIGSNLTSHFSRAILNVTKSDIMDRIQKKYFGEDDSGGVRDQTGQVSSSSTSTSLTFHSFQGLFLVTGIVTVMALIVSESIIWQKPISMVRAYSEKYLFRSNGTLRSRDNSVHLAKADSPTEINISASNSPEMETHDG 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1162 437 SUPERFAMILY Periplasmic binding protein-like II 65 333 - -
Acco13g1162 437 Gene3D - 204 293 - -
Acco13g1162 437 CDD GluR_Plant 37 330 - -
Acco13g1162 437 SMART GluR_14 37 332 IPR001320 GO:0015276|GO:0016020
Acco13g1162 437 MobiDBLite consensus disorder prediction 332 351 - -
Acco13g1162 437 Pfam Bacterial extracellular solute-binding proteins, family 3 66 332 IPR001638 -
Acco13g1162 437 Gene3D - 31 154 - -
Acco13g1162 437 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 127 IPR015683 -
Acco13g1162 437 Gene3D - 294 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1162 Acco-ChrAcco13 9754804 9758034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1162 28 425 Ion Channels AT2G29100 29.854 1.21e-51 185