Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1161 ATGGATCCTGCAGTATTATTCAGCCAACGAGACAGTTGGACTGGAAAATTTCAGGCTTTTGAATTAATCAAAGCAAACTTAGGCTTTGATACAAGACAAATGGCGAACCCAAATTACTATTGCTATTGCTTCCTCTTTATGATTTTTTATGTTGTGTTGCTAATAACTCCAATAGGTGCAGGAGATGAAATTGCAGGGTCACTCCTGGGAGGGAAGAAGTTGATAATTGGACTTCCTTATACATCAGGAAACACCCAGTTTGTGAATATTGAACAACTCAATTCTACTAATAACAATCATCAGGTCGTTCGCATTAGAGGCTATTCTATTGACGTCTTCGATGCTACAATAGCCTACCTTGAGCGTTCACATTACAATATTTCTTTCGAGTATAGAGCTTTTGTAGACGAACATGGAAACAGTGGTGGGAATTACGACGCACTCGTTTATCAGATTTCTGAAGGAAAGTATGATGCTGTGGTGGGAGACGTGACGATTTTGGAAAATCGGTCCAACTATGCAGATTTTACGTTGCCGTATACAAAATCTAATGTGAAGATGCTTGTGAAAGTTCGACATGATCCACGGTTGAATATGTGGATTTTTGTACGACCGTTTGGTTGGGATCTTTGGTTGTCCATTGCTATCATCTCTACTTTTATCGGAGGTATCATACTATTCATGGAACGCAATGTTAAAAAGGATTCAACACTTGAAAATTCATCTTGTAGGAGACAATTCAGAGGGGTTTCTGTCCTGTGGCTTCCTGTTATGCTAGCAGTTTTTCCTGAAAGAGAATCATTGGCCAAAAACTGCTCTAGGTTTGTGCTGATGATGTGGTTGATACTGGTATCTGTGCTCATGCAAAGCTACACAGCATACTTATCATCGATCTTAACAGTACATCAGTTACAACCTCAATACCTTAGTGAGAACGATGTTACAGAAGATCCCAACATTAACGTTGGATTCAACACTGGCTCATTTGTAGAAAACTTATTGGTCAAGAATTTGATGATTGATAGGTCAAGGGTGAAGAACTACTCTTGCATTAAAGAATATAAGGAGGCTTTAGACAAAGGAAGCCTAAAAGGCGGTGTTGATGCTATTTTTGATGAAGCTCCCTCCTTTAAAGTCTTCCTCAACTATTATGGCTCCAATAATTATGCTGTGGTTGGAACTAGGCACCATGCTGGTGGATTTGGTTTTGCATTTCATAAGGGCTCCAACTTAACTTCATACTTTTCTAAAGCCATATTAAATATTAGTGAGAGTAATGGCATGGACAATATTGAGGAGAGATATTTTGGGGCCAACGACGAATATGGTGAAAACCAAGGCATATCTAAGTCATCATCAATAGATGCAAGTCCCAGTCTTACTGCTTACAGCTTTGCAGGTTTGTTCATGGTTATTGGAATTCTTTCGCTGTTAGCTTTGATAATCTCTGAAAGTTATATTTGGCGAAAACCTGTTATGCTAGCAAAGACTTTAAGCCAACAATTTTTGAGTCGGAGTCCGACAAGAATTAGTCCATTAGAGGAAGGTTCAACAACAAGAGATGTTGACGAAGATTGTTCTGCAGACACACAAAATATAGGACCACAAAATGGAGCAGATAATAATAAAACATTGCCTGTGTAA 1644 0.3875 MDPAVLFSQRDSWTGKFQAFELIKANLGFDTRQMANPNYYCYCFLFMIFYVVLLITPIGAGDEIAGSLLGGKKLIIGLPYTSGNTQFVNIEQLNSTNNNHQVVRIRGYSIDVFDATIAYLERSHYNISFEYRAFVDEHGNSGGNYDALVYQISEGKYDAVVGDVTILENRSNYADFTLPYTKSNVKMLVKVRHDPRLNMWIFVRPFGWDLWLSIAIISTFIGGIILFMERNVKKDSTLENSSCRRQFRGVSVLWLPVMLAVFPERESLAKNCSRFVLMMWLILVSVLMQSYTAYLSSILTVHQLQPQYLSENDVTEDPNINVGFNTGSFVENLLVKNLMIDRSRVKNYSCIKEYKEALDKGSLKGGVDAIFDEAPSFKVFLNYYGSNNYAVVGTRHHAGGFGFAFHKGSNLTSYFSKAILNISESNGMDNIEERYFGANDEYGENQGISKSSSIDASPSLTAYSFAGLFMVIGILSLLALIISESYIWRKPVMLAKTLSQQFLSRSPTRISPLEEGSTTRDVDEDCSADTQNIGPQNGADNNKTLPV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1161 547 MobiDBLite consensus disorder prediction 509 547 - -
Acco13g1161 547 Gene3D - 67 199 - -
Acco13g1161 547 SMART GluR_14 92 438 IPR001320 GO:0015276|GO:0016020
Acco13g1161 547 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 70 490 IPR015683 -
Acco13g1161 547 SUPERFAMILY Periplasmic binding protein-like II 45 438 - -
Acco13g1161 547 MobiDBLite consensus disorder prediction 529 547 - -
Acco13g1161 547 Pfam Bacterial extracellular solute-binding proteins, family 3 142 437 IPR001638 -
Acco13g1161 547 Gene3D - 200 344 - -
Acco13g1161 547 Pfam Ligand-gated ion channel 438 474 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1161 Acco-ChrAcco13 9715930 9719540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1161 71 482 Ion Channels AT5G11210 33.494 2.58e-66 228