Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1154 ATGGCACTTTGTGAGATGGAAAACTCAAATTACCATTTCTATGGCTATAAGTACGTTGCCATGATAATTTTTGCAGTGTTGTTATTAATAGATCAGATTGGAGCAGGCGATGATGGAGGTTCACTAATCATGGAAGGGAAGAAGAAGTTGATAGTTGGTGTTCCTAAGAAATGTGGCTCAACAGATTTTTTCGTGGATTTAAAACTGGATTCTACAAATAAGAGTAAGGTCGAGCAGGCTCAGGGATATTCCATTGATGTTTTCAATGCTACAGTATCCTTCCTTCAGAATATTTCTGTAGAGTACGTGGCCTTTGCAAACGAAGATGGAAGTTGTGTTGAGGATTACGACTCACTTCTCGACCAGATCTCTAAAAGAAAGTACGATGCTGTGGTTGGAGATGTGACGATTGTGGCAAATCGTTCCGACTATGTAGATTTTACTTTACCGTACACAAGATCTGATGTGAAGATGCTTGTGAAGGTTCGACATGATCCGCGGTTACAGATGTGGATTTTTGTGCGACCTTTTAATTGGGATCTATGGTTGTCCATTGCCTTCGTCAGTGTGTTTGTAGGAGGTATCATACTATTCATGGAACGGAAAGTTAATCATGATTCATCAGGACCTGAAAATTCGTCTTCTAAGAAGAAACTTAGTGGGTATCATACTATTTTATGGTTTCCCCTAGTGCAAGCAGTTCTTCCTGAAAGGGAATCATTGGCCAAGAGTTGCTCCAGGTTTGTGCTTGTGTTGTGGTTGATTCTTGTATTTGTACTAATGCAAAGTTACACAGCATGCTTGTCATCAATCTTGACCGTACATCAGCTGCAACCTTATTACCCTAATGAGTATGGTGTTATAAATGATCCCAGCATTAAGATTGGATACCAAGGTGGCTCATTCATTAAAGGCTTGTTGCTGGAGAGCTTAAAAGTTGACATGTCAAGGGTGAAGAACTATTCCACCATTGAACAATATAAGGATGCCTTAGATAAAGGAAGCCAGAAAGGTGGTGTTGATGCTATTTTTGATGAAGTTCCCTACATTAAGATCTTCCTCAAAAAGTATGATTCCAAGTATGCTATGATTGGAACGAGACACCGCACTGATGGATTTGGTTTTGCATTCCCCAAAGGGTCCACCTTAACTTCACACTTTTCCAGAGCCGTATTGTATGTGCATGAGAGTATAGAAATGGATGAGATCGAGGAGAAATATTTTGGAAGCAGTAACAACGATGATGAAGGCCAAGACCTATCTAATTCATCGTTAGGTGATGCAAGTTCAAGCAGACTTAGTACTTATAGCTTTGCAGGTTTGTTTATATTAATCGGAGTTCTTTCACTGCTAGCTTTAGCAGTCTCTGAAAGTTATATTTGGCGAAAACCTGTGATGCTAGCAAAAACTTACAGCAGACAAATTTTGAGTCGTAGTTTTACTAGAACTTCTCCATCAGAAGAAGGTTCTACAACAAGAAGAAATGTTGATGAAGGTGGTTTTACAGCCAGAGAAAATAATCAAAATATTGAATTAAAAGATGGAGCAGATAACTATGGAGAAATCTCAAAGACATCTTCTTCATGTGTGTTGATATTGAGACATTTACCTATGTAA 1617 0.3884 MALCEMENSNYHFYGYKYVAMIIFAVLLLIDQIGAGDDGGSLIMEGKKKLIVGVPKKCGSTDFFVDLKLDSTNKSKVEQAQGYSIDVFNATVSFLQNISVEYVAFANEDGSCVEDYDSLLDQISKRKYDAVVGDVTIVANRSDYVDFTLPYTRSDVKMLVKVRHDPRLQMWIFVRPFNWDLWLSIAFVSVFVGGIILFMERKVNHDSSGPENSSSKKKLSGYHTILWFPLVQAVLPERESLAKSCSRFVLVLWLILVFVLMQSYTACLSSILTVHQLQPYYPNEYGVINDPSIKIGYQGGSFIKGLLLESLKVDMSRVKNYSTIEQYKDALDKGSQKGGVDAIFDEVPYIKIFLKKYDSKYAMIGTRHRTDGFGFAFPKGSTLTSHFSRAVLYVHESIEMDEIEEKYFGSSNNDDEGQDLSNSSLGDASSSRLSTYSFAGLFILIGVLSLLALAVSESYIWRKPVMLAKTYSRQILSRSFTRTSPSEEGSTTRRNVDEGGFTARENNQNIELKDGADNYGEISKTSSSCVLILRHLPM 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1154 538 SUPERFAMILY Periplasmic binding protein-like II 22 410 - -
Acco13g1154 538 FunFam Glutamate receptor 325 373 - -
Acco13g1154 538 Gene3D - 45 169 - -
Acco13g1154 538 Gene3D - 378 408 - -
Acco13g1154 538 Pfam Bacterial extracellular solute-binding proteins, family 3 78 409 IPR001638 -
Acco13g1154 538 Gene3D - 318 377 - -
Acco13g1154 538 Pfam Ligand-gated ion channel 410 446 IPR001320 GO:0015276|GO:0016020
Acco13g1154 538 SMART GluR_14 49 410 IPR001320 GO:0015276|GO:0016020
Acco13g1154 538 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 45 463 IPR015683 -
Acco13g1154 538 Gene3D - 170 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1154 Acco-ChrAcco13 9594190 9597568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1154 40 455 Ion Channels AT2G29120 40.288 3.97e-75 254