Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1149 ATGGCAGTAAATTACTATTATGGCTGCCTTCGAATAATTACCTGTGCTGCGTTGTTAACAGCTCAGATTGAAGCAGGCAACAATGAAGCAGGTTCACTCCTAGGTGGCAAGAAGTTAATAATTGGACTTCCTAAGAAATCAGGCTCCACTCAGTTTGTTGATTTACAACTCAATTCAAGTAATAAGATTCAGGTCGTCAAGGCTACAGGCTATTCCATTGAAGTTTTCGAATCTGCAATATCTTACCTTAAGAGTTTAGGTCACAATATTTCTTACGAGTATAGAGCTTTTGTAGACGAAGATGGAAACAGTGCTGGGGATTACAACGAACTCATCTATCAGATTTATGAAGGAAAGTATGATGCCGTGGTGGGAGACGTGGCAATTGTGGCAAATCGGTCAAATTACGTAGATTTTGCTTTGCCATATTCGCCGTCGGATGTGGAGATGCTGGTGAGGGTGCGTAATGATCCAAGGTTGAATATGTGGATTTTTGTACAGCCTTTTAGTTGGGATCTGTGGTTGTCCATAGTCATGTTCAGTATTTCTATTGGAGGTATCATAATGTTAATGGAGCGTGCTACAGAAGAAGAATCAACACTTGAAAATTCACCATCTAGGAAACAACTCAGCAAGTTTTCTATCCTGTGGTTTCCTTTGATGCAAGCAGTTCTTCCTGAAAGAGAATCAGTGTCCAAAGCATGCTCAAGATTTGTGTTGGTGTTATGGTTGATACTAGCATGTGTGCTGATGCAAAGTTACACGGCATGTTTATCATCGATATTGACAGTACATCAGTTGCAACCTACGTATCCGAGTGAAAATGATGTTATAAATAACCCCAACATTAACATTGGATATCCTGATGACTCATTCTTAAGAGGCTTATTTGTGGATAACTTGAAGATTGATAGTGGGAGGTTACAGAACTACTCCGATGTTAAAGAGTATAAGGCGGCTTTGGACAAGGGAAGCCGTAGAGGTGGTGTTGATGCTATTTTTAATGAAGTTGTCTACTTTAAGATCCTCCTCAAGCAATATGGTTCTAATAGTTATGCCTTGGTCAAAACTAGGCACCGCAATGCTGGACTTGGTTTTGCATTCTCAAAAGGCTCTAACTTAACCTCGTACTTCTCTAGAGCCATATTGAATGTGAGTGAGAGTAAAGAAATGGACCAAATTGAGCAGAAATATTTTGGAAGCAATAATGAAATTGAAGGCCAAGACTTATCTTCTGATGCATCATCAGACGATAATAATGCAAGCGCTAGCCTTACCGCTTATAGTTTTGCAGGTCTATTCATGGTAATCGGAATGCTTTCACTCTTAGCTTTACTAGTTTCTGAAAGACGTGTTTGGACAAGACCTATTAAACTAGCAAGAACATGTAGCAAACAGTTGTTGAGTCAGAGTTTTAAAAGAACTAATTCCATAATGCGAAGGTTCTCTGCCTAG 1455 0.3952 MAVNYYYGCLRIITCAALLTAQIEAGNNEAGSLLGGKKLIIGLPKKSGSTQFVDLQLNSSNKIQVVKATGYSIEVFESAISYLKSLGHNISYEYRAFVDEDGNSAGDYNELIYQIYEGKYDAVVGDVAIVANRSNYVDFALPYSPSDVEMLVRVRNDPRLNMWIFVQPFSWDLWLSIVMFSISIGGIIMLMERATEEESTLENSPSRKQLSKFSILWFPLMQAVLPERESVSKACSRFVLVLWLILACVLMQSYTACLSSILTVHQLQPTYPSENDVINNPNINIGYPDDSFLRGLFVDNLKIDSGRLQNYSDVKEYKAALDKGSRRGGVDAIFNEVVYFKILLKQYGSNSYALVKTRHRNAGLGFAFSKGSNLTSYFSRAILNVSESKEMDQIEQKYFGSNNEIEGQDLSSDASSDDNNASASLTAYSFAGLFMVIGMLSLLALLVSERRVWTRPIKLARTCSKQLLSQSFKRTNSIMRRFSA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1149 484 Pfam Bacterial extracellular solute-binding proteins, family 3 105 400 IPR001638 -
Acco13g1149 484 Gene3D - 364 399 - -
Acco13g1149 484 Gene3D - 163 288 - -
Acco13g1149 484 SMART GluR_14 38 401 IPR001320 GO:0015276|GO:0016020
Acco13g1149 484 Gene3D - 32 162 - -
Acco13g1149 484 Gene3D - 313 363 - -
Acco13g1149 484 SUPERFAMILY Periplasmic binding protein-like II 13 402 - -
Acco13g1149 484 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 453 IPR015683 -
Acco13g1149 484 Pfam Ligand-gated ion channel 401 438 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1149 Acco-ChrAcco13 9519329 9523121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1149 36 447 Ion Channels AT2G29120 38.835 1.31e-75 253