Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1148 ATGTCAAGCCAGATGAAAAAGAAGAGCTTTAACCTTTGCCTCTGGTTTCGTTGCTTTTGTACTTTGCAATGGTTCTTTTTAGAACCTTTGAAGGCGAAGGAAACAGATGTTCCAGTAGGTGTAGTTGTTGATCGCAACTCCTCTATTGGAAGTATGGCCATTCGCTGTATCCAAATGGCTCATGACGACTTCTATAAAAATTATTCTCATTACCAAACAAGACTTGATCTTCGAATCAGGGATTCTGAGAAAGATGTCGTCAGAGCAGCATCTGCAGCTTTCGATTTGATGAAGAATGAAAAGGTGCATGCAATTATCGGACCTTTATTTTCAGAACAAGCGAGGTTCGTGATACAACTTGGGCAAAAAGTTCATGTTCCCATCGTCTCGTTTTCAGCCACAAGTCCGTCTCTTTCTTCATTACGAAGCAAATATTTCATTAGGACAGCACAAGATGATCGCTCAAAGGTGAAGGCTATAGCTGCCATTATTGATGCTTACGGATGGCACGAAATCATCCTAATCTACGAAGACACCGAGTATGGGAGGGGTTTGATCCCATATCTCACAGACGAATTGGAAAATGTTAACACACGAGTACCTAACAAAAGTGCCATCGATCCAAATTCTGAGGAATACAAAATCTTAGAGGAGCTGAAGAAGCAAAATCAAAGTGGAAAAAAAATATTTCTTGTTCACATGACTAGTCTCCTTGGGTCCAAATTTTTCTCTGCCGTGAACAAAGCTGGAATGATGCATGAAGGGTATGGGTGGATAGTCACAGATGGGTTATCTAATGTGTTAGACCCTAACTTGGGTCCAAAAGTGATGGATTCTATGCAAGGGGTCTTGGGGATAAGGCCAAAAGTGGAAAAGTCTAGAAGGCTTACAAGTTTCAGAAATAGATGGGAAGCTTCGTCAATCAAACAAGGAGTTGTGTCTTCTCCTTTAACCTTGTTTGGACTTTGGGCTTATGACACAGTTTGGGCGATAGCCATGGCAGTAGAGTCTACGTTTGCAAATTCTAAGGGTAATGACATACTTGTAGAAAGAATCCTAAATACTAAATTTGAAGGTCTCTCTGGGAATATCGATTTGAGTGAAGGACAACTCAAACCCCTAGAGCTTGAAGTATTCAATGTGGTTGGACACAAAGAGAGGATCATTGGAAGTTGGAGTCCACAGAGAGGACTATTCCATGACAAGGAATATTCTTTGAGGAGGAGGAACAAACTAATGCCACCAATATGGCCAGGGGACACAACAAATCAACCAACCAAGTTGAGAATTGGGGTCCCAGTAAGAAAGGGCTTTGTTGAAGTTTTGAAGGTAGAAACTCGATCTTCAAAAAGGGATCCAGATGTTTCTGGCTTTACTTATGATGTGTTCCTTCAAGTGGTCAATGCCTTACCTTTTCCTCTTCCATACGAGTTTTTCGCCTTCCAGGAAAAGAGGGGAGAAACTACCGGTTCCTATGATGAGCTTGTTCTCCAAATTGAGAAAAAGGTGTATGATGCTGTGGTTGGGGACGTAACTATTGTAGCCAATCGTTCGGAACATGTTGATTTTACATTGCCGTATTCAGAATCTGGCGTGTTAATGGTAGTTTCGATGAAGCACGATGAGAGACAAAACATGTGGATATTCTTAAAGCCTTTGAGTCTAGGTCTTTGGTTGACCACTGGTGTAGCATTTGTGCTCACAGGTATCATCATATGGCTTCACGAACGTCGTACAAACACAGAATTTCAAGGATCCCCGCAGCAACAACTTGGGATGATGTTCTGGTTTTCTTTCTCCACCTTAGTCTTTGCTCACATACAGAGATTGCAGCCCAAGTTCATGAATGTGAAAGAGATAAGAAAGAATAATTACTGTGTGGGGTATCAGAAGGGGTCCTTCGTCAAGACGCTTCTGAAAAATCAATTGGGATTCGAGGATGAGACAAAGTTGAAGCCATACGAGACGCCTGAAGAATATGATCGAGCTCTCTCTAATGGTGAGGTTGCTGCTATATTTGATGAAATTCCCTACGTTAAGCTCTTCCTGTTAAAATATGGCTCCAAGTATGCTATGGTGGGGCCAACTTACAAAACTGGTGGATTCGGCTTTGCATTTCCACTAAAATCTCCGTTGGTATCTTATTTTTCGAGGGCAATCCTAAATGTGACTGAAGATGAAGCAAAATTTGAAAGCATTAGGGGCAAGTACTTCTCAAGCGGAATCATATCTGAAGATGAAAGTGAACCATCTATTCCAAACAGTCAAACTAGTCTTACTGTATCAAGCTTTGGAGGTCTTTTCGTCATCATGGGGGTCACTTCTGGGATTTCACTTATCTTCTATTTGTTCAAGTTTGGGTACTCTCTGTCATTAGGAGAAAGATCTCTTTGGTTGTTGCAGTTAAAGGCTCGAATGGTGAAGTATTTGGATCGAAAGGATAGCTCTATGTCTTCGAATAGAAGCGATTCCAGAGTATTCCCTGCCAGTAATATTGTAGAGGAAGATAGAGCCATTACTACGTCTTGA 2529 0.414 MSSQMKKKSFNLCLWFRCFCTLQWFFLEPLKAKETDVPVGVVVDRNSSIGSMAIRCIQMAHDDFYKNYSHYQTRLDLRIRDSEKDVVRAASAAFDLMKNEKVHAIIGPLFSEQARFVIQLGQKVHVPIVSFSATSPSLSSLRSKYFIRTAQDDRSKVKAIAAIIDAYGWHEIILIYEDTEYGRGLIPYLTDELENVNTRVPNKSAIDPNSEEYKILEELKKQNQSGKKIFLVHMTSLLGSKFFSAVNKAGMMHEGYGWIVTDGLSNVLDPNLGPKVMDSMQGVLGIRPKVEKSRRLTSFRNRWEASSIKQGVVSSPLTLFGLWAYDTVWAIAMAVESTFANSKGNDILVERILNTKFEGLSGNIDLSEGQLKPLELEVFNVVGHKERIIGSWSPQRGLFHDKEYSLRRRNKLMPPIWPGDTTNQPTKLRIGVPVRKGFVEVLKVETRSSKRDPDVSGFTYDVFLQVVNALPFPLPYEFFAFQEKRGETTGSYDELVLQIEKKVYDAVVGDVTIVANRSEHVDFTLPYSESGVLMVVSMKHDERQNMWIFLKPLSLGLWLTTGVAFVLTGIIIWLHERRTNTEFQGSPQQQLGMMFWFSFSTLVFAHIQRLQPKFMNVKEIRKNNYCVGYQKGSFVKTLLKNQLGFEDETKLKPYETPEEYDRALSNGEVAAIFDEIPYVKLFLLKYGSKYAMVGPTYKTGGFGFAFPLKSPLVSYFSRAILNVTEDEAKFESIRGKYFSSGIISEDESEPSIPNSQTSLTVSSFGGLFVIMGVTSGISLIFYLFKFGYSLSLGERSLWLLQLKARMVKYLDRKDSSMSSNRSDSRVFPASNIVEEDRAITTS 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1148 842 Gene3D - 619 701 - -
Acco13g1148 842 FunFam Glutamate receptor 152 308 - -
Acco13g1148 842 CDD PBP1_GABAb_receptor_plant 39 399 IPR044440 -
Acco13g1148 842 SUPERFAMILY Periplasmic binding protein-like I 34 393 IPR028082 -
Acco13g1148 842 Pfam Ligand-gated ion channel 555 613 IPR001320 GO:0015276|GO:0016020
Acco13g1148 842 Gene3D - 421 546 - -
Acco13g1148 842 Gene3D - 56 157 - -
Acco13g1148 842 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 787 IPR015683 -
Acco13g1148 842 Gene3D - 158 321 - -
Acco13g1148 842 Pfam Receptor family ligand binding region 57 382 IPR001828 -
Acco13g1148 842 SMART GluR_14 427 740 IPR001320 GO:0015276|GO:0016020
Acco13g1148 842 PIRSF IGluLR_plant 607 840 IPR017103 -
Acco13g1148 842 PIRSF IGluLR_plant 7 609 IPR017103 -
Acco13g1148 842 CDD GluR_Plant 427 738 - -
Acco13g1148 842 Gene3D - 547 618 - -
Acco13g1148 842 FunFam Glutamate receptor 422 546 - -
Acco13g1148 842 Pfam Bacterial extracellular solute-binding proteins, family 3 454 739 IPR001638 -
Acco13g1148 842 SUPERFAMILY Periplasmic binding protein-like II 424 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1148 Acco-ChrAcco13 9484013 9489049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1148 35 814 Ion Channels AT2G29110 39.369 0.0 606