Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1145 ATGAAGAAGAAGAGCTTTAGCCTTTGCCTCTGGTTTTATTGCTTTTGTACTTTTTTTTGGTTCTCTTTAGAACCTTTGAAGGCGAAGGAGGCACAAATACCAGTAGGGGTAGTTGTTGATCTCAACACCTCAATTGGAAGTATGGCCATGCGCTGCATACAAATGGCTCATCAAGATTTCTATAAAAACCATTCTCACTACCAAACAAGGCTTGAGCTTCGAATCAGGGATTCTGAGAATGATGTCGTCAGAGCAGCATCTGCAGCTTTCGATTTGATGAAGAATGAGAAGGTGCATACAGTTATTGGACCTTTATTTTCAGAACAAGCGAGGTTCGTAATACAACTTGGGCACAAATTTCATGTGCCCATCGTCTCATTTTCAGCCACAAGTCCTTCTCTTCCTCCAATCCAAAGCAAATATTTCATAAGGACAGCACACGATGATTGCTCACAGGTGGAGGCTATAGCCGCCATTGTTGAAGCTTACGGATGGCACGAAATCATCCCAATCTACGAAGACACTGAATACGGCAACGGTCTGATCCCACATGTCACAGACGCCTTGGAAAAAGTAAACACACGAGTGCCATACAGAAGTGCCATCAATCCAAATTCTGAGGAATCCGAAATCTTAGAGGAGCTGAAGTTAAATCAAAGTGGAAAAAGAATATTTCTTGTTCACATGACTGGTCTTGTTGGGTACAAATTCTTCTTAGCCTTGAACAAAGCTGGAATGATGAGGGAAGGGTATGGGTGGGTAGTCACAGATGGGTTATCTAATGTGTTAGACCCTAATTTGGGTCCAAAAGCGATGGATTCTATGCAAGGTGTCGTGGGGATAAAGCCAAAAGTGGAAAAGTCTACAAGTTTCAGAAATAGATGGAAAGCTTCGTCAATTAAACAAGGTGGTGCGTCTTCTCCTTTAACCCTGTTTGGACTTTGGGCTTATGACACAATTTGGGCAATGGCCATGGCAGTAGAGTCTACGTTTACAAATCCTGAGGATAATGAGACACTGATAGATAGAATCGTAAGTACTAAATTTGAAGGCCTCTCTGGGTTTTTCAATTTGAGTGAAGGGGGACTCAAACCCTTAGAGTTTGAAGTATTCAATGTGGTAGGACGCAAAGAGAGAGTCATTGGACATTGGAGCCCACAGAGAGGACTATTCCACGACAATAATTGGAGTTCAAGAGAGAAACTAAAGCCACCAATATGGCCAGGGGACACAACAAATCAACCAACCAAGTTGAGAATTGGGGTTCCAATAAGAAAGGGTTTTGTTCAATTTGTGAAAGTGGAAACACGGTCTTCTTCTAATGGTACTCCTCCAGATGTTTCTGGCTTTACTATTGATGTGTTCCTCGAAGTGGTCAAAGCTTTACCTTTTCCTCTTCCATTTGAGTTTCTCCCATTCAAGATTGATATTGGAGAAATTAAGGAGTATGATGCTGTAGTTGGAGACATAACAATTGTAGCTAGCCGTGCGGAACATTTTGACTTTACGTTGCCATATTCAGAATCAGGAGTGTCAATGGTAGTTTCGATGAAGCCTGATGAGAGACAAAACATGTGGATATTCTTAAAGCCTTTGAGTCCAAGTCTTTGGCTGACCACTGCTGCAGCATTCGTCCTCACGGGTATCATCATATGGCTTCACGAACGTCATACCAACACAGAATTCCAAGGATCCCCACAGCAACAACTTGGGATGATGTTCTGGTTTTCTTTCTCCACCTTAGTCTTCGCTCACAAGGAAAGATTAGTGAACAATTGGTCGCGTTTTGTGCTGATATTGTGGGTATTTGTGGTTCTCATCATAACACAAAATTATACTGCAAGTGTAGCTTCCATGTTAACTGTACAGAGATTGCAGCCTAAGTTCATGAATGTGAATGAGATAAGGAAGAATAATTACTGTGTGGGGTATCAGAAGGGCTCCTTCGTCAAGATGCTTCTGAAAAATCAATTGGGATTCGAGGATGAGACAAAGTTGAAGCAATATGAGACTCCTGAAGAGTATGATCGAGCTCTCTCTAGTGGTGAGGTTGCTGCTGTGTTTGATGAAGTCCCCTACTTGAAGATCTTCCTCACAACATACGGCTCCCACTCCAAGTATGCCATGGTGGGGCCGACCTATAAAACTGGTGGATTCGGCTTTGCATTTCCACTAAAATCTCCGTTAGTGTCTTACTTTTCAAGGGCAATCCTAAATGTGACTCAAGATGAAGAAAAAATTGACAGGATTAGGAGCAAGTACTTCTCAAGCGAAATCATATCTGAACAGTATGAAAGTGGATCATCAATTCCAAATACTCAGGCTAGTCTCACTCTATCCAGCTTTGGAGGGCTTTTCATCATCACAGGCGTCATTTCTGGGATTTCACTTCTCTTCTATTTGTTCAAGTTTGAGTACTCTTTTTCAGAGGAAAGATCATCTCTTTGGTTGTTGCAGTTAAAGGCTCGAATAGTGAAGTGCTTAGATCGAAGGGATAGCTCTTTATTTTTGAATAGAAGCGATTCCAAAATATTCCCTGCAAGTAATATTGTAGAGGGAAATAGAGCCATTCCTACGTTCCCTCGCTGCTGA 2592 0.419 MKKKSFSLCLWFYCFCTFFWFSLEPLKAKEAQIPVGVVVDLNTSIGSMAMRCIQMAHQDFYKNHSHYQTRLELRIRDSENDVVRAASAAFDLMKNEKVHTVIGPLFSEQARFVIQLGHKFHVPIVSFSATSPSLPPIQSKYFIRTAHDDCSQVEAIAAIVEAYGWHEIIPIYEDTEYGNGLIPHVTDALEKVNTRVPYRSAINPNSEESEILEELKLNQSGKRIFLVHMTGLVGYKFFLALNKAGMMREGYGWVVTDGLSNVLDPNLGPKAMDSMQGVVGIKPKVEKSTSFRNRWKASSIKQGGASSPLTLFGLWAYDTIWAMAMAVESTFTNPEDNETLIDRIVSTKFEGLSGFFNLSEGGLKPLEFEVFNVVGRKERVIGHWSPQRGLFHDNNWSSREKLKPPIWPGDTTNQPTKLRIGVPIRKGFVQFVKVETRSSSNGTPPDVSGFTIDVFLEVVKALPFPLPFEFLPFKIDIGEIKEYDAVVGDITIVASRAEHFDFTLPYSESGVSMVVSMKPDERQNMWIFLKPLSPSLWLTTAAAFVLTGIIIWLHERHTNTEFQGSPQQQLGMMFWFSFSTLVFAHKERLVNNWSRFVLILWVFVVLIITQNYTASVASMLTVQRLQPKFMNVNEIRKNNYCVGYQKGSFVKMLLKNQLGFEDETKLKQYETPEEYDRALSSGEVAAVFDEVPYLKIFLTTYGSHSKYAMVGPTYKTGGFGFAFPLKSPLVSYFSRAILNVTQDEEKIDRIRSKYFSSEIISEQYESGSSIPNTQASLTLSSFGGLFIITGVISGISLLFYLFKFEYSFSEERSSLWLLQLKARIVKCLDRRDSSLFLNRSDSKIFPASNIVEGNRAIPTFPRC 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1145 863 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 808 IPR015683 -
Acco13g1145 863 FunFam Glutamate receptor 148 305 - -
Acco13g1145 863 PIRSF IGluLR_plant 3 835 IPR017103 -
Acco13g1145 863 Gene3D - 421 524 - -
Acco13g1145 863 Gene3D - 48 154 - -
Acco13g1145 863 Pfam Bacterial extracellular solute-binding proteins, family 3 447 756 IPR001638 -
Acco13g1145 863 CDD GluR_Plant 417 755 - -
Acco13g1145 863 Gene3D - 155 312 - -
Acco13g1145 863 FunFam Glutamate receptor 525 655 - -
Acco13g1145 863 CDD PBP1_GABAb_receptor_plant 35 391 IPR044440 -
Acco13g1145 863 Pfam Ligand-gated ion channel 757 791 IPR001320 GO:0015276|GO:0016020
Acco13g1145 863 SUPERFAMILY Periplasmic binding protein-like I 31 385 IPR028082 -
Acco13g1145 863 Gene3D - 322 420 - -
Acco13g1145 863 Pfam Receptor family ligand binding region 51 374 IPR001828 -
Acco13g1145 863 Gene3D - 525 664 - -
Acco13g1145 863 SMART GluR_14 417 757 IPR001320 GO:0015276|GO:0016020
Acco13g1145 863 SUPERFAMILY Periplasmic binding protein-like II 413 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1145 Acco-ChrAcco13 9460133 9463892 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1145 2 806 Ion Channels AT2G29120 41.599 0.0 633