Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1141 ATGAGTTGAGAATGGACTCGTGACCCCAGGCATCCCCGTAAGCCAAGAGAAGTGAGCTTGGAGATAAAAATGGTGATAACGGTCGGAGAAGCTTCTCTTTCTCCCCTCTGCTTCAGTCGTCTCCACTGCAAAACTTCTTCTAGATTCAGAAGTTGCTTCGTCCGAGCTAGCATCTCTATCCACAGAAGACCCAACAATATTCAATCCTGGAATTCTGGGCACCTCTCAACCAGCAAAGGGGCAGCAAATTTTGATCCCTTGGGTATTAACCCAGATTTATCTTCTGCTCCAAATCCCACTTGGGAAAATTTGATATGCCTGTTTTCACAAACATTTCAGAGTTTTTCAAGTACTGGGAAGGAAAAACCTAACCCTTCTCGAGGCGCAGCAGCTGCAATAGAGGATAGTTCAATTGATTTAGGGGATTTCTTCAAGGGTCCATTACCAGGAAAGTTTCTCAAGCTTTTAGGACTTCTTGCTTTGTCAAGGCTCGGCGTATACATACCTCTTGGTGGGGTTAATAGGGATGCTTTTGTTGGCAATTTGGACCAGAACAGTTTATTAAGCACTCTAGACTCTTTTTCTGGAGGAGGTATTGGCAGACTTGGGATATGCTCTCTTGGTATTGTCCCCTTTATTAACGCCCAGATTGTGTTTCAACTTCTTGCACAAGTATATCCCAAGCTACAAGATCTTCAAAAAAGAGAAGGTGAGTCAGGAAGAAAGAAAGTACTTGAGTACACACGATATGCCTCAGTCGGATTCGCTGTTGTACAGGCAATTGGTCAAATACTCTACCTACGGCCTTATGTCAATGACTTCAGTGCACAATGGGTTCTATCTTCTGTCATCTTATTGACTCTTGGATCTGTATTTACAACATATATTGGTGAGAGAATTTCAGACCTAAAACTTGGGAACGGAACATCGCTTTTGATATTCACAAACATTATCTCCTACTTGCCTGCCTCGTTTGGAAGGACATTTATACAAGCATTTAATGATGCTAACTACGTTGGACTCATCACCTTGATTGTGTCCTTCTTTTTGTTGGTTCTTGGTATTGTTTATGTTCAGGAAGCAGAGAGAAAGATTCCTCTTAACTATGCTTCAAGATACACAAGCAGAAGCAGGGGACTTGATAAATCTGCTTACCTACCCTTTAAGGTAAATAGTTCTGGAGTGATGCCCATCATATTTTCTACGTCGTCATTAGCCCTTCCTGGTACTTTGGCGCGATTCACTGGCATAAATGCTCTGAAGAATGCTGCTCTGGCTTTGAATCCTGGGGGTTCCTTCTATCTGCCAATGAACATCCTTTTAATAGCATTCTTCAACTATTATTACACTTTCCTACAATTGGACCCTGATGATTTGAGTGAACAATTGAAACGTCAAGGTGCATCAGTTCCACTTGTTCGACCAGGAAGAACTACAGCCACCTTTATTAAAACAGTTCTTAGCCGAATATCAGTACTCGGTTCAACATTTCTGGCGATTTTAGCTGCCGGACCAGCTGTTGTTGAGCAGGTTACGCACCTGACTGCATTTAGGGGATTTGCTGGGACTTCTATTCTTATTCTTGTCGGTTGCGCCACGGACACAGCAAGAAAAGTTCAAGCTGAGATTATATCCCAGAAGTACAAGAACATAGAATTCTATAACTTTGACAAGTATTGA 1680 0.422 MSXEWTRDPRHPRKPREVSLEIKMVITVGEASLSPLCFSRLHCKTSSRFRSCFVRASISIHRRPNNIQSWNSGHLSTSKGAANFDPLGINPDLSSAPNPTWENLICLFSQTFQSFSSTGKEKPNPSRGAAAAIEDSSIDLGDFFKGPLPGKFLKLLGLLALSRLGVYIPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGESGRKKVLEYTRYASVGFAVVQAIGQILYLRPYVNDFSAQWVLSSVILLTLGSVFTTYIGERISDLKLGNGTSLLIFTNIISYLPASFGRTFIQAFNDANYVGLITLIVSFFLLVLGIVYVQEAERKIPLNYASRYTSRSRGLDKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGINALKNAALALNPGGSFYLPMNILLIAFFNYYYTFLQLDPDDLSEQLKRQGASVPLVRPGRTTATFIKTVLSRISVLGSTFLAILAAGPAVVEQVTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYNFDKY 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1141 559 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 144 551 IPR002208 GO:0015031|GO:0016020
Acco13g1141 559 Hamap Protein translocase subunit SecY [secY]. 140 552 IPR026593 -
Acco13g1141 559 ProSitePatterns Protein secY signature 2. 295 312 IPR030659 -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 393 412 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 487 505 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 202 222 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 244 267 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 152 170 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 302 325 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 276 301 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 432 454 - -
Acco13g1141 559 PRINTS Preprotein translocase SecY subunit signature 521 539 - -
Acco13g1141 559 SUPERFAMILY Preprotein translocase SecY subunit 144 542 IPR023201 -
Acco13g1141 559 Gene3D SecY subunit domain 143 548 IPR023201 -
Acco13g1141 559 ProSitePatterns Protein secY signature 1. 203 222 IPR030659 -
Acco13g1141 559 FunFam Preprotein translocase subunit SECY, chloroplastic 143 548 - -
Acco13g1141 559 Pfam SecY 204 535 IPR002208 GO:0015031|GO:0016020
Acco13g1141 559 NCBIfam preprotein translocase subunit SecY 151 548 IPR002208 GO:0015031|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1141 49 559 Chloroplast and Mitochondria Gene Families AT2G18710 79.337 0.0 827