Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1140 ATGGAATTTGAGCAAGGGAAAATTGTCAGATTCTTCTCGGATGGCAAAAGTCATAAGGAACATGAACCACTCTGGCGAGGAACTGAACTATCAGCTCTGGATAAGCCGTCATCTGGATACAGTGTTTGGTCAGCTTCCTCGCTCAAGCAAGACTATGCACTAACGTGGGGGGAAAATAGATTGGTTGAAACGTTTAAAGTTGGGGGATCTAACGTGTTTCCGGAGGACCCTGAGCCATGGCGCAAAAGGATACTGGATCCATCTAGTGATATTGTGTTGAAATGGAACCGAGTCTTTATAGTTTCGTGCTTGATGGCTCTTTTTGTAGACCCATTGTATCTGTACTTGCCCAGCGTGAGAAGTGATGCAGAGTCTTCATGTGCGAGGACAGACCTGAACTTACGGATTGCTGTGACCTTTCTACGGACTGGCACAGACTTTTTCTATCTATTGCACTTGATCATTAAGTTCCGGACAGCATATGTGGCACCTAGCTCGCGGGTATTTGGTCGGGGTGAACTTGTCACGGACCCAAAGAAAATTGCTAGAAGATATATAAGATCTGATTTCTTCATTGATTTTATTGCCACTCTGCCTCTTCCCCAAATACTCATTTGGTTTATTATACCAGCAACAAGAAGCTCTCTTGCTGATCAGAATAATAATGCTCTGGCATTGATTGTTCTGCTCCAATATGTTCCAAGATTATATTTGATCTTTCCACTAAGTTCTGAAATAATTAAAGCAACTGGAGTGGTTACAAAGACTGCATGGGCAGGAGCTGCATATAATCTGCTGTTATATATGCTGGCCAGTCATGTCTCAGGGGCAGCTTGGTATCTTCTATCAGTGGACCGTTATACTTATTGTTGGAAATCTTTTTGCAAAAAGGATCCGAGTCTGAAATGCTTTCTTTATCTGGACTGTGATTCTCTTAACCGTGAGGAGCGCAAAACATGGGCAAATGTTACAAGCGTGTTTAACAACTGTGATCCCAGTAATGGACAATTTGATTTTGGGATATTCAAAAATGCAGTGTCAAAACATGTGGTCTCCACAAACTTCATCGTAAAGTACTTCTATTGTTTATGGTGGGGTTTGCAGCAACTTAGTTCTTATGGGCAGAACTTGGCGACGACCACTTTTATGGGCGAGACATCATTTTCTATTCTGATTTCCATCCTGGGTCTTGTGTTGTTTTCACATTTGATTGGGAACATGCAGACATATTTGCAATCAACCACCATAAGGCTTGAGGAGTGGAGGCTCAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGCCAACTCCCTGATGATTTGAAACGACGTGTTCGACGATTTGATCAGTGCAAGTGGCTGGCAACTCGTGGAGTTGATGAAGAAACAATTCTACGAGGATTACCGGCTGATCTTCGCCGTGATATCCAACGCCACCTATTCTTAGATCTTGTTCGACGAGTTCCCTTCTTCTCACAGATGGATGATCAACTATTAGATGCAATATGTGAGCGGCTGGAATCCTTTTTGAGCACTCAGGGCACCTACATTGTTCGAGAAGGTGACCCTGTGACTGAAATGCTCTTTATTGTCAGAGGTAGAGTGGATAGTTCTACTACAAATGGTGGTCGGAGTGGTTTCTTCAATTCCATCTTATTGAGACCTGGAGATTTTTGTGGTGAGGAGCTACTTGCTTGGGCCTTGCTTCCAAAGTCAACCGTTAACCTGCCTTCCTCAACCAGGACTCTTAGATCACTTACTGAGGTTGAAGCTTTCGCTCTTCGAGCTGAAGACCTCAAGTTTGTGGCGAATCAATTTAGGCGCCTACACAGCAAGAAGCTGCAGCACACCTTCCGGTTTTATTCCCATCATTGGAGGACTTGGGCTGCCTGCTTCATACAGGCTGCATGGCGTCGGTATAAGAAACGGATGTCTACGACATTCAAGGATATCGCTTTCAGGGAATCCTTCACTATGGATGCAATTTCGGCCAATGAGAGAGAACATGGGGACGAAAGTCCTGCTCATCCAAATTCTTCTCAGGCTAAATTAAACCTTGGGGTCACGTTACTTGCCTCAAGGTTTGCTGCAAACACAAGAAGGGGGGCTCTTAAGATTAAAGATGACCTGCCAAAACTACAAAAACCTGAAGAACCTGACTTTACTGCTGAAGCTGATGATGACTCGTAA 2190 0.4402 MEFEQGKIVRFFSDGKSHKEHEPLWRGTELSALDKPSSGYSVWSASSLKQDYALTWGENRLVETFKVGGSNVFPEDPEPWRKRILDPSSDIVLKWNRVFIVSCLMALFVDPLYLYLPSVRSDAESSCARTDLNLRIAVTFLRTGTDFFYLLHLIIKFRTAYVAPSSRVFGRGELVTDPKKIARRYIRSDFFIDFIATLPLPQILIWFIIPATRSSLADQNNNALALIVLLQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVSGAAWYLLSVDRYTYCWKSFCKKDPSLKCFLYLDCDSLNREERKTWANVTSVFNNCDPSNGQFDFGIFKNAVSKHVVSTNFIVKYFYCLWWGLQQLSSYGQNLATTTFMGETSFSILISILGLVLFSHLIGNMQTYLQSTTIRLEEWRLKRRDTEEWMRHRQLPDDLKRRVRRFDQCKWLATRGVDEETILRGLPADLRRDIQRHLFLDLVRRVPFFSQMDDQLLDAICERLESFLSTQGTYIVREGDPVTEMLFIVRGRVDSSTTNGGRSGFFNSILLRPGDFCGEELLAWALLPKSTVNLPSSTRTLRSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSTTFKDIAFRESFTMDAISANEREHGDESPAHPNSSQAKLNLGVTLLASRFAANTRRGALKIKDDLPKLQKPEEPDFTAEADDDS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1140 729 Pfam Cyclic nucleotide-binding domain 513 601 IPR000595 -
Acco13g1140 729 Gene3D Jelly Rolls 488 608 IPR014710 -
Acco13g1140 729 Pfam Ion transport protein 95 416 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco13g1140 729 MobiDBLite consensus disorder prediction 707 729 - -
Acco13g1140 729 Gene3D - 98 414 - -
Acco13g1140 729 SUPERFAMILY cAMP-binding domain-like 420 612 IPR018490 -
Acco13g1140 729 SUPERFAMILY Voltage-gated potassium channels 86 412 - -
Acco13g1140 729 Gene3D Helix hairpin bin 418 480 - -
Acco13g1140 729 CDD CAP_ED 490 621 IPR000595 -
Acco13g1140 729 FunFam Cyclic nucleotide-gated ion channel 1 488 606 - -
Acco13g1140 729 ProSiteProfiles cAMP/cGMP binding motif profile. 490 573 IPR000595 -
Acco13g1140 729 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 78 721 - -
Acco13g1140 729 FunFam Cyclic nucleotide-gated ion channel 1 417 481 - -
Acco13g1140 729 PRINTS EAG/ELK/ERG potassium channel family signature 453 460 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g1140 729 PRINTS EAG/ELK/ERG potassium channel family signature 153 162 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g1140 729 PRINTS EAG/ELK/ERG potassium channel family signature 385 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g1140 729 PRINTS EAG/ELK/ERG potassium channel family signature 403 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g1140 729 PRINTS EAG/ELK/ERG potassium channel family signature 270 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g1140 729 PRINTS EAG/ELK/ERG potassium channel family signature 359 376 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g1140 729 SMART cnmp_10 490 621 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1140 Acco-ChrAcco13 9372528 9377388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1140 1 727 Ion Channels AT4G30360 66.485 0.0 974