Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco13g1138 | ATGCTCTCAAGATCTTGCTTAGACTTATTGAATTTGGTCTCGGTTGATGATTACGGAGCTCTGGGTCGGATCCCAAAAGACATGGCGCCCCCAGGAGTTGTGTCCAATTTCGAAGTCCGTGATGATTCCGATTCCGGTGCGGCTTCCGACGACACCGTCTCCTCTGTTATGCAAGAACGAAGAATCATCGTTGCTAATCAGTTACCGATAAAATCTTTTCGTGACAAGGAGACGAGAAAATGGAATTTCGAATTCGATAGTGATAGTATCTATTTGCAGCTCAAAGACGGGTTTCCCTCTGACGTGGAGGTAATCTATGTGGGTTCATTGAAAGCCGACATCGTCGATCCATCGGAACAAGAAGAAGTTTCCCAAATATTACTCGAAAAGTTCCGATGCGTGCCGGCGTTTTTACCGTCCGACGTTCAGAACAAGTTCTACCATGGATTCTGCAAGCATTACCTCTGGCCTTTGTTTCACTACATGTTACCCATGTCGCCGAGTCACGGTGCCCGCTTCGAACGATCGCAGTGGAAGGCTTACGTTTACGCCAACAAGATTTTCGCCGATAAGGTAACGGAGGTGATAAACCCTGAAGAGGATTACGTTTGGATTCAGGATTATCATCTCATGATCTTGCCTACCATATTGAGAAGACGATTTCACCGAGTCAAACTCGGATTTTTCCTTCACAGCCCATTTCCGTCCTCTGAAATCTACAGAACAATCCCAGTTCGTGACGAGATCCTCCGAGCTTTTTTAAATTGCGATTTGGTTGGTTTTCATACATTTGATTACGCGAGACATTTCTTGTCCTGTTGCAGTAGAATGCTGGGTTTGGATTATGAGTCCAAAAGGGGTTACATTGGGCTAGATTATTATGGTCGTACAGTGACGATCAAGATCTTGCCGGTGGGGATTCACATGGGTCAGCTTCAATCTTTGTTGTCTTTATCTCAAACCGGTGATAGGATTAAGGAATTAAAGAAACAATATGAGGGGAGGATTGTTATTTTGGGTGTGGACGATATGGATATGTTTAAAGGTTTAAGCTTGAAGTTATTGGCAATGGGACAACTCTTGGAAGTTCATGAAGATCTAAGGGGTAAAGTTGTTTTGGTCCAGATTCTGAATCCGGCAAGAAGCAGAGGAAAAGATATCCAAGATGTTCAGAACGAAACAAATTCAATCGCCAATGAGATCAATGAGAAATTCGGCGAACCAGGATACCAGCCAATCGTATTTGTTGATGGCCCTGTTTCGACGCAGGAGAAAGCCTCGTACTACGCCATTTCTGAATGTTGTATTGTGAATGCTGTAAGAGATGGTATGAATTTAGTACCTTATAAGTACACTGTTTGTAGACAGGGGATCGATGCGAATAATGATTCGATAAGTCCTAAACGAAGTGTCATCATAGTGTCTGAGTTCATAGGTTGTTCTCCGTCGCTGAGTGGAGCAATCAGAGTGAATCCATGGAACATAGAAGACGTAGCAGAGGCGATGAATTCGGCGATTTCGATGTCAGATTCAGAAAAACAATTGCGACACGAAAAGCATTACAAGTACATAAGCTCGCATGATGTAGCCTATTGGGCAAGGAGTTTCGATCATGATTTAGAAAGGGCTTGTAGAGAACATTACCATAAGAGATGTTGGGGTGTTGGATTTGGCTTGGGATTTAGAATTGTGGCTCTTGATCCTACGTTCAGGAAGCTCACAGCAGAAAGCATTGTGTCTGCATATAGAAACACACAGAACAGGTTGATTCTTTTAGACTATGATGGTACTATGATGCCACAGGTATCAATAGACAAAACCCCAAGTGAAGAGGTTATCTCTGTTTTGAATCTCTTATGTAGTGACCCTAGAAACATAGTGTTTATAGTTAGTGGCAGAGATAAGAATTGCCTCAGCAAATGGTTTTCTCCATGCCACAAGCTTGGCCTCTCAGCAGAACATGGCTTCTTCACCAGGTGGGGTTCTGATAGTGCTTGGGAAACATGTGGTTTAGGAATGGATTTTGAGTGGAAAAAAGTTGTGGAACCAGTAATGGCACATTATACAGAAGCAACAGATGGTTCTTTCATTGAAGCAAAGGAGAGTGCTATGGTATGGCACCACCAAGAAGCCGACCCTCATTTCGGATCCTTCCAAGAAAAAGAGCTTCTTGATCACCTCGAAAGCGTGCTAGCCAACGAACCAGTTGTAGTAAAAAGAGGACAACACATTGTTGAAGTAAAACCTCAGGGTGTGAGCAAGGGCATAGTAGTGGAGAATCTAATATCAACGATGGTGAGCAAGGGAAATAAACCAGATTTTCTTCTGTGCATAGGAGATGATAGGTCAGATGAAGATATGTTTGAGAGTCTTGCTGGTTCAGTATCAGATCCCTTAACCCTAAAGGCTATACCACATGTCTATGCCTGTACAGTGGGTCAGAAACCAAGCATGGCAAAATATTATCTGGAAGACACTGTTGATGTCATCAAGTTACTCCAAGGACTAGTCTCTGCATCATAA | 2523 | 0.4308 | MLSRSCLDLLNLVSVDDYGALGRIPKDMAPPGVVSNFEVRDDSDSGAASDDTVSSVMQERRIIVANQLPIKSFRDKETRKWNFEFDSDSIYLQLKDGFPSDVEVIYVGSLKADIVDPSEQEEVSQILLEKFRCVPAFLPSDVQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFERSQWKAYVYANKIFADKVTEVINPEEDYVWIQDYHLMILPTILRRRFHRVKLGFFLHSPFPSSEIYRTIPVRDEILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLQSLLSLSQTGDRIKELKKQYEGRIVILGVDDMDMFKGLSLKLLAMGQLLEVHEDLRGKVVLVQILNPARSRGKDIQDVQNETNSIANEINEKFGEPGYQPIVFVDGPVSTQEKASYYAISECCIVNAVRDGMNLVPYKYTVCRQGIDANNDSISPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVAEAMNSAISMSDSEKQLRHEKHYKYISSHDVAYWARSFDHDLERACREHYHKRCWGVGFGLGFRIVALDPTFRKLTAESIVSAYRNTQNRLILLDYDGTMMPQVSIDKTPSEEVISVLNLLCSDPRNIVFIVSGRDKNCLSKWFSPCHKLGLSAEHGFFTRWGSDSAWETCGLGMDFEWKKVVEPVMAHYTEATDGSFIEAKESAMVWHHQEADPHFGSFQEKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMVSKGNKPDFLLCIGDDRSDEDMFESLAGSVSDPLTLKAIPHVYACTVGQKPSMAKYYLEDTVDVIKLLQGLVSAS | 840 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco13g1138 | 840 | FunFam | Trehalose-6-phosphate synthase 2 | 671 | 750 | - | - | |
| Acco13g1138 | 840 | Gene3D | Glycogen Phosphorylase B; | 314 | 525 | - | - | |
| Acco13g1138 | 840 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 49 | 837 | IPR001830 | GO:0003824|GO:0005992 | |
| Acco13g1138 | 840 | NCBIfam | HAD-IIB family hydrolase | 589 | 794 | IPR006379 | - | |
| Acco13g1138 | 840 | Gene3D | - | 671 | 750 | - | - | |
| Acco13g1138 | 840 | NCBIfam | trehalose-phosphatase | 587 | 837 | IPR003337 | GO:0003824|GO:0005992 | |
| Acco13g1138 | 840 | CDD | HAD_TPP | 589 | 831 | - | - | |
| Acco13g1138 | 840 | Gene3D | - | 590 | 823 | IPR023214 | - | |
| Acco13g1138 | 840 | Pfam | Glycosyltransferase family 20 | 60 | 541 | IPR001830 | GO:0003824|GO:0005992 | |
| Acco13g1138 | 840 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 53 | 313 | - | - | |
| Acco13g1138 | 840 | SUPERFAMILY | HAD-like | 588 | 836 | IPR036412 | - | |
| Acco13g1138 | 840 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 717 | 840 | - | - | |
| Acco13g1138 | 840 | Gene3D | Glycogen Phosphorylase B; | 52 | 313 | - | - | |
| Acco13g1138 | 840 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 587 | 704 | - | - | |
| Acco13g1138 | 840 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 60 | 545 | - | - | |
| Acco13g1138 | 840 | Pfam | Trehalose-phosphatase | 591 | 825 | IPR003337 | GO:0003824|GO:0005992 | |
| Acco13g1138 | 840 | CDD | GT20_TPS | 60 | 541 | IPR001830 | GO:0003824|GO:0005992 | |
| Acco13g1138 | 840 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 315 | 525 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco13g1138 | Acco-ChrAcco13 | 9361030 | 9363733 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco13g1138 | 1 | 840 | Trehalose Biosynthesis Gene Families | AT2G18700 | 67.962 | 0.0 | 1200 |