Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1132 ATGCCTCCTCTTAATCCTCCTGCTCCTCCTGTTCATCACCATGAACAAACCCAACCAAAACCCAGCCCCAAACTCCTCTCAATCCTTTTCAAGGCCATCGTCATGACCGTTCTCACCTCCTTCTTTTTCATCTTTCTCAGTGTTGCCGCCTTAGTCCTTCTCCAACTCTGCTTCATCTCCGACATCATCCACCGCGTCCGCTCCCGCCCCACTATCCAATTCGGAGCTTCATCCAATGAAATCTCGCCGCTTGACGTCAAGAAGCTTCCCGAATTCCGGGTTACTAGCGGAACCGAACCCGGACCCGAAACCGAATGCGTTGTCTGCTTGGATGGCTTCAGGAGCGGCCACTGGTGCAGAAAGCTCACCGGATGTGGCCATTTGTTCCACCGGAAATGTGTGGATGCGTGGCTGGTGAAGGTGGCTGCGTGTCCCACATGCAGGACACCTGTTCGATTAAATGCAGGGAGGGATGTTGTAGGTTCGGCTCTAGAGGCCAATAGAGTGGTGGGGACGGTGCTTCCTGAATTTTTTGCCTTGTAA 543 0.5322 MPPLNPPAPPVHHHEQTQPKPSPKLLSILFKAIVMTVLTSFFFIFLSVAALVLLQLCFISDIIHRVRSRPTIQFGASSNEISPLDVKKLPEFRVTSGTEPGPETECVVCLDGFRSGHWCRKLTGCGHLFHRKCVDAWLVKVAACPTCRTPVRLNAGRDVVGSALEANRVVGTVLPEFFAL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1132 180 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Acco13g1132 180 MobiDBLite consensus disorder prediction 1 20 - -
Acco13g1132 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 155 IPR013083 -
Acco13g1132 180 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 13 158 - -
Acco13g1132 180 MobiDBLite consensus disorder prediction 1 16 - -
Acco13g1132 180 SMART ring_2 106 147 IPR001841 -
Acco13g1132 180 SUPERFAMILY RING/U-box 105 154 - -
Acco13g1132 180 Pfam Ring finger domain 105 148 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1132 20 153 C3H Transcription Factor Family AT2G18670 42.222 1.38e-28 103