Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1130 ATGATTCTGTTGTTATTTATATCTGGACCCATATGTAGGATGGAAGGTGGAATTCTACCACTTGTTGAATTGCTTGAATTTACTGACACAAAGGTGCAAAGAGCAGCTGCTGGTGCACTGCGAACTCTGGCATTTAAAAATGATGAAAATAAAAATCAGGTTGGTGTAATAGGAAATCTAGTACACTCTTCACCTAATATAAAGAAAGAAGTTCTTCTTGCTGGGGCTTTACAACTTGTTATTGGATTACTTGGCTCCCCCTACTCTGAGAGCCAAAGGGAAGCTGCCTTGTTACTTGGACAGTTTGCTGCAATTGATTCAGATTGTTTGGAATTTCTTATTGGGCTCCTTGGCTCTACTAGTCCTAAACAGCAACTTGATGGTGCTGTTGCTTTATGCAAGTTGGCCAACAAAGCCATGACTCTATCACCAATAGATGCTGCTCCTCCTTCGCCAACGCCCCGGGTTGGATTAGATATGATCTAA 486 0.4156 MILLLFISGPICRMEGGILPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQVGVIGNLVHSSPNIKKEVLLAGALQLVIGLLGSPYSESQREAALLLGQFAAIDSDCLEFLIGLLGSTSPKQQLDGAVALCKLANKAMTLSPIDAAPPSPTPRVGLDMI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1130 161 Gene3D - 10 54 IPR011989 -
Acco13g1130 161 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 16 58 IPR000225 GO:0005515
Acco13g1130 161 Gene3D - 55 143 IPR011989 -
Acco13g1130 161 SMART arm_5 8 45 IPR000225 GO:0005515
Acco13g1130 161 SMART arm_5 64 104 IPR000225 GO:0005515
Acco13g1130 161 SUPERFAMILY ARM repeat 12 137 IPR016024 -
Acco13g1130 161 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 54 109 IPR044282 -
Acco13g1130 161 Pfam Armadillo/beta-catenin-like repeat 15 44 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1130 Acco-ChrAcco13 9294129 9295278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1130 16 140 U-box Gene Family AT2G23140 31.387 4.56e-07 46.6