Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1104 ATGGGGAAACACAACAGTAACTCAAACAAGAACCATAACCCTAAGCCACCTAATAACAGTACCAGTGTGACAGCTACCACCACAACCAAGAAACGAACCAGACGAAGTGTCCCCAGAGATACACCTCTTCAACGTAGCTCAGAATATAGAGGAGTCACTCGGCACCGATGGACAGGACGATATGAAGCTCATTTATGGGACAAGAATTGTTGGAATGAATCGCAGAACAAGAAAGGACGACAGGGTGCTTATGATGATGAAGATGCTGCAGCACATGCTTATGATCTAGCAGCTTTAAAATACTGGGGTCAAGATACCATTCTCAACTTTCCGCTATCAACCTATCTCAACGAGATGAAAGAGATGGAGGGTCAGTCAAGGGAAGAATATATTGGATCATTAAGAAGGAAAAGCAGTGGTTTTTCTCGGGGAGTTTCTAAATACAGAGGCGTGGCAAGACATCATCATAATGGAAGATGGGAGGCTCGCATTGGCAGAGTTTTTGGCAACAAATATCTTTATCTTGGGACTTATGCTACCCAAGAAGAAGCTGCCACAGCATATGATATGGCAGCTATTGAATATCGTGGGCTTAATGCTGTCACCAATTTTGACCTAAGTCGTTACATTAAGTGGCTTAAGCCCAAAATTAATAACGGCACCAACATGATTAACAGTACTAGTAGTAGTAACGGTATTAAGAGTACAATGCTTAGTGACTCTGATAATAATAACCCTAATTACTCCGATACTACTAACTTCACTGCCCCATCACTAAACCCTAATATTTATCAAGAACATGGGTTCAATGGCTTCATCACCACCCACCAGCAAGATTCTGCTTCGTTCAGTAGTGGGGATGAAACCACCACCACGACGGTCACCGCCAGCTATGCTCAGTCACGGCAGGCGAATGCCACATCAGCCCTAGGGCTCTTGCTCCAGTCGTCCAAGTTCAAGGAGATGATGGAGATGACGTCGGCTGCCGATCTGTCGATGGCGACGGTCACTGCGCCTGTGAAGCCAGAGGAGTCTCGGTTGCCGGCATGCAGGTTTCCAGCGGATATTCAGACATACTTTGAGTGTGAAGATGACTCTAACAATGATGGATATGGAGAAGGGGATCATAATACAGTGTTCAGTGAGCTCAATAATTATTCTTTTGTTTCTCCAATGTTCAGCTATCATGATGACTTTGAGACATGA 1206 0.4453 MGKHNSNSNKNHNPKPPNNSTSVTATTTTKKRTRRSVPRDTPLQRSSEYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEDAAAHAYDLAALKYWGQDTILNFPLSTYLNEMKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPKINNGTNMINSTSSSNGIKSTMLSDSDNNNPNYSDTTNFTAPSLNPNIYQEHGFNGFITTHQQDSASFSSGDETTTTTVTASYAQSRQANATSALGLLLQSSKFKEMMEMTSAADLSMATVTAPVKPEESRLPACRFPADIQTYFECEDDSNNDGYGEGDHNTVFSELNNYSFVSPMFSYHDDFET 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1104 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 284 - -
Acco13g1104 401 MobiDBLite consensus disorder prediction 1 49 - -
Acco13g1104 401 FunFam AP2-like ethylene-responsive transcription factor 146 207 - -
Acco13g1104 401 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 PRINTS Ethylene responsive element binding protein signature 187 207 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 Pfam AP2 domain 146 197 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 Pfam AP2 domain 48 103 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 ProSiteProfiles AP2/ERF domain profile. 48 111 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 SUPERFAMILY DNA-binding domain 47 113 IPR016177 GO:0003677
Acco13g1104 401 CDD AP2 146 207 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 MobiDBLite consensus disorder prediction 1 31 - -
Acco13g1104 401 Gene3D AP2/ERF domain 48 113 IPR036955 GO:0003700|GO:0006355
Acco13g1104 401 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Acco13g1104 401 SMART rav1_2 48 117 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Acco13g1104 401 SUPERFAMILY DNA-binding domain 146 207 IPR016177 GO:0003677
Acco13g1104 401 FunFam AP2-like ethylene-responsive transcription factor 47 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1104 Acco-ChrAcco13 9044834 9048008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1104 2 209 AP2-EREBP Transcription Factor Family AT5G57390 61.611 7.43e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco13g1104 AP2 3.2e-08 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1370 04 15005829 15008503 Acco13g1104 13 9044834 9048008 CCT