Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1092 ATGTTTCTAATTTTCTGTCTTGTCGTTTTTCGCTTTGGTGGTGTTTATGGTGGCGAAGAAAATGCCCACAAGATGAATGATGAAAGTTCACTGAGAAGTTTCATGTCAGGAATTGTTTCAGACCCAGAAAACTCTCTAGCTAGTTGGAGGTCTTCTGGTGTTCCATTTTGTAATTGGTCGGGAATTGTATGTAACAATGTGAGTGGGAAAGTTACAGAGATTCATCTTGGAAGGAGTTCACTAGGGGGTACAATTTCTCCTACTATTGGTAACCTCTCTGATTTGAAAATTCTTGATCTTTCTGAAAACTTTTTTGTGGGTCATATCCCAAAAGAGTTGGGGAGTCTAATTCAGCTTGAAAAACTCAGTTTGTATTGGAATCTTCTAGAAGGGAAGGTCCCCTCAGAGCTGGGTTCACTTCTAAACTTACACCACCTAGACATAGGGAGTAATAGGCTTGAGGGTGTGATTCCGCCTTCATTATTCTGCAATTTTTCATCTTCATTGAAAAATTTAGACCTCTCTAACAATTCATTAGTTGGACAAATCCCCTTGAGTAATGAGTGTGTGCTTCATGAGCTTAAGCATCTCTTAGTTTGGTCTAACCATTTTGTAGGACAAGTTCCTCTGGCTCTTTCAAACTCCACAAAACTAGAATGGCTTGATTTGGGGTCAAACAGGTTTAGTGGTGAGCTACCATCAGAGATTGTAGGTAATTTGCCATACATACAATATCTCTACTTATCCTCCAATGGCTTTGTTGCCCATAATGGTAATACCAATCTTGAACCATTCTTTGCTTCCTTAGTGAATTTGTCTAACCTTCAAAATCTTGAATTAGATGCAAACTATCTTGGAGGGAAGCTGCCTCATATAATTGGCGATCTTCCAACATCATTAATTCAGCTTCATCTTGAGAATAATCTCATACATGGTTCCATTCCCTCAGACATCGCCAAACTTTTCAATCTGACTCTATTAAACTTGTCCAGTAACCAACTAAATGGATCAATCCCTCCAAACCTATCCCTGATGAGTAAGCTTGAGAGAGTCTTTTTGTCCAATAATTCATTATCTGGTGAGATTCCTTCAACCCTTGGTCAAATTCCACATCTGGGTCTGCTAGATTTGTCAAGAAACAAGCTTTCAGGTTCAATACCAGATAATTTTGCCAATCTTTCCCAGTTAAGAAGGCTTTTACTTTATGATAACCACCTTTCTGGAACAATACCACCAAACCTTGGAAAATGTGTCAATTTGGATATTTTAGACCTATCTCACAACAAGATTTCAGGGGTTATTCCTTCAGAAGTTGCAGCCTCCAGTAACTTGAAATTATACTTGAATTTGTCAAACAATAAATTAGATGGGCCTCTGCCATTAGAGCTCAGCAAAATGGACATGGTTCTAGCCATCGATCTATCTATGAACCACCTCTCCGGTAGAATCCCACCACAGTTTGAAAGTTGCATAGCACTCGAGTACCTTAACCTGTCGGGTAATTCTTTAGAAGGCCCTCTTCCATATTCTTTAAGCCAACTACTTTACATTCGAACACTGGACGTGTCTCTGAATCGATTGACTGGGGAAATACCTCAATCCCTGCAGTTATCTTCTACTCTCAAAGAACTCAATTTCTCTTTCAATAAATTCTCGGGGAGCGTACCAATTGAGGGAGCTTTTTCATCTCTCACCGCAGACTCTTTCCTAGGAAATGATGGCCTTTGTGGCTCTGTAAAAGGCTTGCCTAGCTGCCATAAGAAACGTAGCCAGCATTGGATTCTCTTGTTAATTTTGGTGTTAATCTTTGGCACCTTCATGTCCTGCATGTTTAGGCTCAATACTGGAGTCCGAAAGAGACTGGCCATTGTTAGCATGGGAAACTTGGAGCGTGAAGAGGAAAGAAAAGAACTCAATTACCCAAGAATTTCACATAAACAACTAATTGAAGCCACTGGGGACTTCAATGCTTCAAACTTGATTGGTTCAGGTCGGTTTGGAAAGGTCTATAAGGGAGTCCTCCAAGACAATACAAGAATAGCAGTGAAAGTACTAAACTCTTCAACTACTGATGATATTTCAGGGAGCTTTAAAAGGGAATGTCAGATCCTAAAGAAGACCAGGCACAGAAACTTGATGAGGATCATCAAAGTTTGCAGCAAGCCAGAGTTCAAGGCTCTTGTTCTTCCACTAATGCCAAACGGAAGCCTCGAGAGGCATCTATATCCAAGCAGTGGTCTGAGCCAGAGGTTGGATTTGGTTCAGTTAGTGAGGATCTGCAGTGATGTAGCTGAGGGAATGGCCTATCTTCACCATTACTCTCCAGTTAAAGTGGTTCATTGTGATCTTAAGCCAAGTAACATACTTCTTGATGATGATATGACTGCTCTGGTGACAGATTTTGGTATTGCAAGGCTTGTTAAATGTGATGAAAGCAACCCCTCCAATAACTCAACATCTTTCAGTTCAACACAAGGCTTGCTAGTGGGCTCTATTGGCTACATAGCCCCTGAGTATGGAATGGGAAAACACGCCTCAACTGAAGGTGATGTCTATAGTGTTGGAGTAATTCTGCTAGAAATTGTAACAAACAGGCCCCCTACTGATGTCCTTATCCATGAAGGTTCAAGCTTGCATGAATGGGTTAAGAGACAGTATCCACACAAGCTTGAAGCCATTGTGAAACAAGCATTGGAAAGGTATTTCCCTTTAAGCCTCCCTCCAGTTCAACATAACAGAATCTGGCAAGATGTTATCATGGAACTCATAGAGCTGGGCCTTATTTGCACACAGAACAATCCTTCAATGAGACCAAGCATGTTGGATGTAGCTCAGGAACTTGGGAGGTTGAAAGACTACTTGTCTAATCCATCACTTCATATGATTGAAGAAGTCAATTGCAAGGATACTATCCTTTCAACTGTTTCAACTGTGAATATTACTTAA 2946 0.406 MFLIFCLVVFRFGGVYGGEENAHKMNDESSLRSFMSGIVSDPENSLASWRSSGVPFCNWSGIVCNNVSGKVTEIHLGRSSLGGTISPTIGNLSDLKILDLSENFFVGHIPKELGSLIQLEKLSLYWNLLEGKVPSELGSLLNLHHLDIGSNRLEGVIPPSLFCNFSSSLKNLDLSNNSLVGQIPLSNECVLHELKHLLVWSNHFVGQVPLALSNSTKLEWLDLGSNRFSGELPSEIVGNLPYIQYLYLSSNGFVAHNGNTNLEPFFASLVNLSNLQNLELDANYLGGKLPHIIGDLPTSLIQLHLENNLIHGSIPSDIAKLFNLTLLNLSSNQLNGSIPPNLSLMSKLERVFLSNNSLSGEIPSTLGQIPHLGLLDLSRNKLSGSIPDNFANLSQLRRLLLYDNHLSGTIPPNLGKCVNLDILDLSHNKISGVIPSEVAASSNLKLYLNLSNNKLDGPLPLELSKMDMVLAIDLSMNHLSGRIPPQFESCIALEYLNLSGNSLEGPLPYSLSQLLYIRTLDVSLNRLTGEIPQSLQLSSTLKELNFSFNKFSGSVPIEGAFSSLTADSFLGNDGLCGSVKGLPSCHKKRSQHWILLLILVLIFGTFMSCMFRLNTGVRKRLAIVSMGNLEREEERKELNYPRISHKQLIEATGDFNASNLIGSGRFGKVYKGVLQDNTRIAVKVLNSSTTDDISGSFKRECQILKKTRHRNLMRIIKVCSKPEFKALVLPLMPNGSLERHLYPSSGLSQRLDLVQLVRICSDVAEGMAYLHHYSPVKVVHCDLKPSNILLDDDMTALVTDFGIARLVKCDESNPSNNSTSFSSTQGLLVGSIGYIAPEYGMGKHASTEGDVYSVGVILLEIVTNRPPTDVLIHEGSSLHEWVKRQYPHKLEAIVKQALERYFPLSLPPVQHNRIWQDVIMELIELGLICTQNNPSMRPSMLDVAQELGRLKDYLSNPSLHMIEEVNCKDTILSTVSTVNIT 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1092 981 CDD STKc_IRAK 661 950 - -
Acco13g1092 981 Gene3D Ribonuclease Inhibitor 26 188 IPR032675 -
Acco13g1092 981 SMART serkin_6 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1092 981 Pfam Protein kinase domain 657 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1092 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Acco13g1092 981 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 60 260 - -
Acco13g1092 981 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Acco13g1092 981 ProSiteProfiles Protein kinase domain profile. 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1092 981 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 347 947 - -
Acco13g1092 981 SUPERFAMILY L domain-like 323 577 - -
Acco13g1092 981 Gene3D Phosphorylase Kinase; domain 1 626 730 - -
Acco13g1092 981 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Acco13g1092 981 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 732 959 - -
Acco13g1092 981 Gene3D Ribonuclease Inhibitor 259 594 IPR032675 -
Acco13g1092 981 FunFam Leucine-rich repeat receptor-like protein kinase TDR 269 587 - -
Acco13g1092 981 Pfam Leucine Rich Repeat 493 513 IPR001611 GO:0005515
Acco13g1092 981 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515
Acco13g1092 981 Pfam Leucine rich repeat 347 406 IPR001611 GO:0005515
Acco13g1092 981 SUPERFAMILY Protein kinase-like (PK-like) 638 947 IPR011009 -
Acco13g1092 981 Gene3D Transferase(Phosphotransferase) domain 1 732 968 - -
Acco13g1092 981 ProSiteProfiles Leucine-rich repeat profile. 419 440 IPR001611 GO:0005515
Acco13g1092 981 SMART LRR_typ_2 92 116 IPR003591 -
Acco13g1092 981 SMART LRR_typ_2 272 296 IPR003591 -
Acco13g1092 981 SMART LRR_typ_2 369 392 IPR003591 -
Acco13g1092 981 SMART LRR_typ_2 140 164 IPR003591 -
Acco13g1092 981 SMART LRR_typ_2 321 345 IPR003591 -
Acco13g1092 981 SMART LRR_typ_2 393 417 IPR003591 -
Acco13g1092 981 SMART LRR_typ_2 216 239 IPR003591 -
Acco13g1092 981 ProSiteProfiles Leucine-rich repeat profile. 323 345 IPR001611 GO:0005515
Acco13g1092 981 SUPERFAMILY RNI-like 73 359 - -
Acco13g1092 981 Gene3D Ribonuclease Inhibitor 189 258 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1092 Acco-ChrAcco13 8943476 8947118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1092 22 952 Receptor kinase-like Gene Family AT3G47570 34.426 1.81e-153 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco13g1092 Pkinase 9.8e-44 CL0016