Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1082 ATGCAGCAAGGTGATCAGACGGTGATAAGCTTGAGACCTGGTGGTGGTCGTCCCGGTGGTAGCAGGTTCCTTGCTCCTCGATTCGATTCATCCTCATCGGCTTCCTCTGCTTCTCCTGCTTTTGGTTCCTTTGCCTCTGATCCTTCTCTCCTTCGTCCCCATAGCGGTGCTCCAACTTCTTTTTCCATTAAGGCTGGAGATGCACGGTTTGAGGGTCGTGAGCGTGTGCGATACACTAAGGATCAGCTTTTACAACTGAGGGAGGTTGTTGAGATCCCTGAAGATATTTTAAAAATTAAACAAGATATAGAAACCGAACTTTTTGGTGAAGATCAAAGCTGGGGCCGCGCAGAAAATTCTGCACAACAATTTCAGAATTGGTACTCTGAGCCAGACAACCGTGATTGGCGTGGCCGGTCTGGGCAACTTCCTGCTTCTTCAGAAGAGAAGTCATGGGAAAATCTGAGAGAAAATAGAGAGTTTGGAAATCGATTTGACTCAAGGAACCAGGATTCTAATCAGTTTAATAGGCAGGATCAACTGAATTCCCAGTTTGCGAGGGCACATATTTCTTCTAACCAAGGAGGACCTGCTCCAACTTTAATCAAAGCTGAAGTTCCATGGTCGGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTGAAAACTGTTAAAGGAATTTTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGGTCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGATGTCATTTCACTCATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTGATGCAAAGCTGCCTCCATTCCCCTCTGATGAACCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATAACTGCCAGGAGGCTTTTGAAGGCGCTGATAAAATGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGACGGAGCGTAGGGATAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGAAATATCCGACTAATTGGAGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATTACATTGTTCAGCAACTTTTGGGATCTGATAGCAAGTCCTGTCCTGTTGAGGAAAACGTTGAAGCCATTTGTCAATTTTTCAATACTATTGGTAAACAACTTGACGAAAACCAAAAATCACGGCGTTTTAATGACATGTACTTTAGCCGATTGAAAGATCTGAGCACAAACCCTCAACTTGTATCACGGTTGAGGTTCATGGTTCGTGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAGGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGTGCTACTGCAAGCATTAGAAATAACCGTGCTGCAGCTTCGGGTGTTCAAGGAAATATAAGCCCAGGTGGATTTCCGATTTCTCGACTTGGTACAGGAGGTATGATGCCTGGAATGCCGGGGACCAGGAAGATGCCTGGGATGCCTGGAATGGATAATGACAACTGGGAAATGCCTAGGACAAGATCAATGCCAAGAGGAGACATGTCAAGTACGCAAGCTGCAGGATGTGGCCAGTCTCCTTTACTCTCGAAGCCATCAGCCCTGAACTCAAAGCTGTTACCTCAAGGTAGTGGTCTCATAAGTGGAAGAAGTAGTGCCCTACTGCATGGTGGTGGTGGTGCTCCTTCTCGTCCATCAAACTTTGTTTCTGGTGCCGAGCCTCAAATCCCTACTTCTGTGAAAGCTGTCCCTAGTGGGTCTTTTGAGAAGCCACAGACTCCACCTCCAAAATTAAATTTTGACGAACTTCACCGCAAAACCATCTCTCTTCTGGAAGAATATTTCAGTGTTTGCCTTTTAGATGAGGCATTGCAGTGTGTGGTAGAACTAAAGGCTCCATCTTACCACCCTGAGTTTGTTAAGGAGGCCGTTTCCCGTGCCCTAGACAAAAGTCCACCTTGTGTTGATATCGTTGCCAATCTTCTTGAGTATCTATTTATTAAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTGTGTTGTTTGGTTCCATGCTGGACGATATGGGCATAGATTTGCCTAAAGCCCCAAATAATTTTGGTGAGATAATTGGGAAGCTAATTTTGGCGGGGGGATTGGATTTTAAGGTGGTTTTAGAGATCCTTAAGAAGGTGGAAGATGACTTTTTCCAGAAAGCAATACTTGAAGCTGCAGAAAGGGTCATCAGTGCTGCATCTGGGCAAGCCCTTTTAGATTCCCAAGCCTCCGACATAGAGGCTTGCCACAGTTTGCTCAAGTGA 2391 0.4483 MQQGDQTVISLRPGGGRPGGSRFLAPRFDSSSSASSASPAFGSFASDPSLLRPHSGAPTSFSIKAGDARFEGRERVRYTKDQLLQLREVVEIPEDILKIKQDIETELFGEDQSWGRAENSAQQFQNWYSEPDNRDWRGRSGQLPASSEEKSWENLRENREFGNRFDSRNQDSNQFNRQDQLNSQFARAHISSNQGGPAPTLIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLDAKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADKMREEVRQMTAPEQETERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHYIVQQLLGSDSKSCPVEENVEAICQFFNTIGKQLDENQKSRRFNDMYFSRLKDLSTNPQLVSRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRAAASGVQGNISPGGFPISRLGTGGMMPGMPGTRKMPGMPGMDNDNWEMPRTRSMPRGDMSSTQAAGCGQSPLLSKPSALNSKLLPQGSGLISGRSSALLHGGGGAPSRPSNFVSGAEPQIPTSVKAVPSGSFEKPQTPPPKLNFDELHRKTISLLEEYFSVCLLDEALQCVVELKAPSYHPEFVKEAVSRALDKSPPCVDIVANLLEYLFIKKILTARDIGTGCVLFGSMLDDMGIDLPKAPNNFGEIIGKLILAGGLDFKVVLEILKKVEDDFFQKAILEAAERVISAASGQALLDSQASDIEACHSLLK 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1082 796 MobiDBLite consensus disorder prediction 540 561 - -
Acco13g1082 796 Pfam MA3 domain 633 744 IPR003891 -
Acco13g1082 796 MobiDBLite consensus disorder prediction 26 43 - -
Acco13g1082 796 Gene3D - 213 448 - -
Acco13g1082 796 FunFam Eukaryotic translation initiation factor isoform 4G-2 213 448 - -
Acco13g1082 796 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 57 792 IPR045208 GO:0003743
Acco13g1082 796 MobiDBLite consensus disorder prediction 1 58 - -
Acco13g1082 796 SUPERFAMILY ARM repeat 625 774 IPR016024 -
Acco13g1082 796 SMART if4_15 222 447 IPR003890 GO:0003723|GO:0005515
Acco13g1082 796 SMART ma3_7 632 744 IPR003891 -
Acco13g1082 796 ProSiteProfiles MI domain profile. 631 753 IPR003891 -
Acco13g1082 796 MobiDBLite consensus disorder prediction 527 561 - -
Acco13g1082 796 SUPERFAMILY ARM repeat 215 450 IPR016024 -
Acco13g1082 796 MobiDBLite consensus disorder prediction 127 153 - -
Acco13g1082 796 Gene3D - 624 790 - -
Acco13g1082 796 Pfam MIF4G domain 222 447 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1082 Acco-ChrAcco13 8827799 8832912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1082 1 794 Eukaryotic Initiation Factors Gene Family AT5G57870 64.000 0.0 967