Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1081 ATGTCTGGTGGTAGTCATCCCGGCGGTAGCAGGTTCCTTGCCCCTCCATTCGACTCATCCTCATCAGCTTCCTCTGCTTTTGGTTCCGTTGCCTCTGATCCTTCTCTCCTTCGTCCCCATGGCGGTGCTCCAACTTCTTTTTCCATTAAGTCTGCACAACAATTTCAAAATCGGTACTCCGAGCCAGACAAGGGTGACTGGTGTGGCCGGTCTGGGCAACTTCCTGCTTCTTCAGAAGAGAAGTCATGGGAAAATCTGAGAGAAAATAGAGAGTTTGGAAATCGATTTGACTCAAGGAACCAGGATTCTAATCAGTTTAATACGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCACATATTTCTTCTAACCAAGGAGGACCTGCTCCAACTTTATTCAAGGCTAAAGTTCCATGGTTATCTAGAAGACGAAACCTATCCGAAAAGAATCGTGTCTTGAAAACTGTTAAAGGAATTCTAAACAACCTTACCCGTGAGGAATTTGATGTCCTGAAGGGTCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGATGTCGTTTCACTTATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTGATGCAAAGCTGCCTCCATTCCCCTCTGATGAACCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATAACTGCCAGGAGGCTTTTGAAGGCGCTGATAAAATGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGTAGGGATAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGAAATATCCGACTAATTGGAGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGCAACTTTTGGGATCTGATAGCAAGTCCTGTCCAGTTGAGGAAAACGTTGAAGCCATTTGTCAATTTTTCAATACTATTGGTAAACAACTTGACGAAAGCCAAAAATCACGGCGTATTAATGACATGTACTTCAGCCAATTGAAAGATCTGAGCACAAACCCTCAACTTGTATCACGGTTGAGGTTGATGGTTCTTGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAGGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCAGCCAGGTTCTACTGCAAGCATTAGAAATAACCGTGCTGCAGTTTCGGGTGTTCAAGGAAATATATGCCCTAGTGGATTTCCGATATCTAGACTTGGTACAGGAGGTATGAATATGATTCCTGGATTGCCGGGGACCAGGGAGATGCTTGGGATGCCTGGAATGGATAATGACAAACGGGAAATGCCTAGGGCAAGATCAATGTCAAGATGGGACATGCCAAGTATGCAAGCTGAAGGATGTGGCCAGCCTCCTTTACTCTTGAAGCCATCAGCCCCGAACTCAAAGCTTTTACCTCAAGGTAGTGGTCGCATAAGTGGAAGAAGCAGTGCCCTAGTGCATGGTGGTGGTGGTGCTCCTTCTCGTCCATCAAACTTTGTTTCTGGTGCCGAGCCTGCATCTCAAATCCCTACTTCTGTGAAATCTGTTCCTAGCGGGTCCTTTGAGAAGCCACAGACTCCACCTCCAAAATTAAATTTTGACGAACTTCACCACAAAACCATCTCTCTTCTGGAAGAATATTTCAGTGTTTGCCTTTTAGATGAGGCATTGCAGTGTGTGGTAGAACTAAAGGCTCCATCTTACCACCCTGAGTTTGTTAAGGAGGCCGTTTCCCTTGCCCTAGACAAAAGTCCACCCTGTGTTGATATCGTTGCCAATCTTCTTGAGTATCTATTTATTAAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTGTGTTGTTTGGTTCCATGCTGGACGATATGGGCATAGATTTGCCTAAAGCCCCAAATAATTTTGGTGAGATAATTGGGAAGCTAATTTTGGCGGGGGGATTGGATTTTAAGGTGGTTTTAGAGATCCTTAAGAAGGTGGAAGATGACTTTTTCCAGAAAGCAATACTTGAAGCTGCAGAAAGGGTCATCAGTGCTGCATCTGGGCAAGCCCTTTTAGATTCCCAAGCCTCCGACATCGAGGCTTGCCACAGTGTTCTCAAGTGA 2196 0.4454 MSGGSHPGGSRFLAPPFDSSSSASSAFGSVASDPSLLRPHGGAPTSFSIKSAQQFQNRYSEPDKGDWCGRSGQLPASSEEKSWENLRENREFGNRFDSRNQDSNQFNTQDQLNSQFARAHISSNQGGPAPTLFKAKVPWLSRRRNLSEKNRVLKTVKGILNNLTREEFDVLKGQLIDSGITSADILKDVVSLIFDKAVLEPTFCPMYALLCSDLDAKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADKMREEVRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQQLLGSDSKSCPVEENVEAICQFFNTIGKQLDESQKSRRINDMYFSQLKDLSTNPQLVSRLRLMVLDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLQPGSTASIRNNRAAVSGVQGNICPSGFPISRLGTGGMNMIPGLPGTREMLGMPGMDNDKREMPRARSMSRWDMPSMQAEGCGQPPLLLKPSAPNSKLLPQGSGRISGRSSALVHGGGGAPSRPSNFVSGAEPASQIPTSVKSVPSGSFEKPQTPPPKLNFDELHHKTISLLEEYFSVCLLDEALQCVVELKAPSYHPEFVKEAVSLALDKSPPCVDIVANLLEYLFIKKILTARDIGTGCVLFGSMLDDMGIDLPKAPNNFGEIIGKLILAGGLDFKVVLEILKKVEDDFFQKAILEAAERVISAASGQALLDSQASDIEACHSVLK 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1081 731 SMART if4_15 153 378 IPR003890 GO:0003723|GO:0005515
Acco13g1081 731 SUPERFAMILY ARM repeat 146 381 IPR016024 -
Acco13g1081 731 MobiDBLite consensus disorder prediction 1 84 - -
Acco13g1081 731 MobiDBLite consensus disorder prediction 479 561 - -
Acco13g1081 731 ProSiteProfiles MI domain profile. 566 688 IPR003891 -
Acco13g1081 731 SMART ma3_7 567 679 IPR003891 -
Acco13g1081 731 Pfam MIF4G domain 153 378 IPR003890 GO:0003723|GO:0005515
Acco13g1081 731 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 56 724 IPR045208 GO:0003743
Acco13g1081 731 MobiDBLite consensus disorder prediction 46 60 - -
Acco13g1081 731 MobiDBLite consensus disorder prediction 531 552 - -
Acco13g1081 731 Gene3D - 144 379 - -
Acco13g1081 731 Pfam MA3 domain 570 679 IPR003891 -
Acco13g1081 731 MobiDBLite consensus disorder prediction 15 31 - -
Acco13g1081 731 FunFam Eukaryotic translation initiation factor isoform 4G-2 144 379 - -
Acco13g1081 731 Gene3D - 559 725 - -
Acco13g1081 731 SUPERFAMILY ARM repeat 560 709 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1081 Acco-ChrAcco13 8806525 8816189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1081 54 729 Eukaryotic Initiation Factors Gene Family AT5G57870 62.996 0.0 810