Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1068 ATGGTTACTGCATGTGCAACTGTGCTTGGTTGCAGACAGCAGTCGTATATATCCTGTATTTGTGATCAACTTTCAAGGATGTTTGACTGTAATTACAAGTCACAATACATGCATAGCCAGCGGGAAAAATTTGCGAGGTTGGATCACTTGGACTCTAGACTATCTCAATCTTCTGATGCTGGACATAATAAATGTGGATCTGGTACATTTGAATTAAGCCATGGTGGTTATGCACGCTTGGGAACCACTGGATCATTTAAAAGAGGAATGAGAAAGGGTTCTGAAGGGTTGAAATCAATTGGCCGATCACTTGGATTTGGAGTATCTCGAGCAGTCTTCCCAGAAGACCTTAAAGTGTTAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCTTGTGGAATAAGCCTTTTGTAATCTCATGCATTTTAGCTCTGTCTATTGATCCATTATTTTTTTATCTCCCTGTGATCAACGATTCAGCAAACTGTCTCAGTATAGATCGAAACATGGCAATCATAGTCAGCACTCTGAGAGCAGTCATTGATGCCTTCTACCTTATACGCATGGCTCTCCAATTTTGTACTGCTTACATAGCTCCATCATCTCGTGTCTTTGGACGAGGTGAACTTGTTATAGATCCATCACAAATTGCCAAGCGATACTTGCAGCGATATTTCATCATCGATTTCCTTTCAGTATTGCCCTTGCCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTACTGGCAACAAAGGAGGCCTTACTATTCATTATCTTGCTTCAATATGTTCCTCGATTGCTCCGGATGGTACCGTTGACTTCAGAACTTAAGAGAACATCTGGTGTCTTTGCTGAAACTGCATGGGCAGGAGCTGCATATTATTTGCTATTGTACATGCTAGCTAGTCATATAGTTGGAGCATTTTGGTACTTGTTAGCCATTGAACGAAACGACTCATGCTGGCAGAAGGCTTGCAGTGAAAATGGATGTAACAAAAATTTCTTGTATTGTGGCAACCAGCACATGGAAGGTTATAGTGCCTGGCGGAATAGAAGCGGAGATATTTTCAGTTCACAGTGCTCTGTTGATGGTGAAAATCCACCTTTTGATTATGGAATTTTTACCCAAGCATTTTCATCCGGGATTGTTTCATCAAAAACGTTCATCTCTAAATACTGCTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACGCTTGGCCAAGGGCTTCAAACCAGCACCTACACTGGGGAAGTTATATTTTCAATAGGGCTGGCCATTTTTGGGCTTATCCTCTTTGCACTCCTGATTGGTAACATGCAGACGTATCTTCAGTCTCTTACCATCAGGCTTGAGGAAATGAGAGTCAAAAGACGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCCCACGAGCTTAGGGAACGTGTAAGACGCTATGATCATTATAAGTGGCTGGCAACACGTGGCGTGGACGAAGAAAGTTTGGTGCAGAGTCTACCAAATGATCTTAGAAGAGATATTAAGCGTCATCTTTGTCTGGCTTTAGTGACAAGGGTGCCACTATTTGAGAGTACGGATGAGAGATTACTTGATGCAATTTGTGAGAGACTGAAACCATGCTTATTTACAGAGAATACTTACATTGTTTGTGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTTGAGAGTGTTACCACGGATGGCGGGAGAAGCGGATTTTTCAACCGAACTTTCCTAAAAGAGACAGACTTCTGCGGCGAGGAGCTTTTAACATGGGCCTTGGATCCCAAGTCTGGTTCCAACCTTCCATCTTCTACTAGAACAGTCAGAACACTTTCAGAGGTTGAGGCTTTTGCATTGATTTCTGAAGACTTAAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGTAGGCAGGTTCAACATACCTTTCGCTTTTATTCACAACAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCAGCCTGGCGTCGTTATTGCAAGAGGAAGGCTATGGAGCTTCGTCGGAAAGAAGAATGTGAAGGAGCTCACAACAATGCCAGTGGTGGTGGTTCATACAGCATTGGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGTGGTGTACATCGTAATAGGAATGCCAAGACTGCCAGGGAATTGGTGAAACTACAGAAGCCACCAGAGCCTGACTTTACTGCAGATGATTGA 2265 0.4291 MVTACATVLGCRQQSYISCICDQLSRMFDCNYKSQYMHSQREKFARLDHLDSRLSQSSDAGHNKCGSGTFELSHGGYARLGTTGSFKRGMRKGSEGLKSIGRSLGFGVSRAVFPEDLKVLEKKIFDPQDKFLLLWNKPFVISCILALSIDPLFFYLPVINDSANCLSIDRNMAIIVSTLRAVIDAFYLIRMALQFCTAYIAPSSRVFGRGELVIDPSQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKEALLFIILLQYVPRLLRMVPLTSELKRTSGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQKACSENGCNKNFLYCGNQHMEGYSAWRNRSGDIFSSQCSVDGENPPFDYGIFTQAFSSGIVSSKTFISKYCYCLWWGLQNLSTLGQGLQTSTYTGEVIFSIGLAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDHYKWLATRGVDEESLVQSLPNDLRRDIKRHLCLALVTRVPLFESTDERLLDAICERLKPCLFTENTYIVCEGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNLPSSTRTVRTLSEVEAFALISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKAMELRRKEECEGAHNNASGGGSYSIGATFLASRFAANALRGVHRNRNAKTARELVKLQKPPEPDFTADD 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1068 754 ProSiteProfiles cAMP/cGMP binding motif profile. 531 615 IPR000595 -
Acco13g1068 754 SUPERFAMILY Voltage-gated potassium channels 126 453 - -
Acco13g1068 754 ProSiteProfiles IQ motif profile. 667 696 IPR000048 GO:0005515
Acco13g1068 754 Gene3D Jelly Rolls 529 649 IPR014710 -
Acco13g1068 754 Pfam Ion transport protein 134 457 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco13g1068 754 CDD CAP_ED 531 662 IPR000595 -
Acco13g1068 754 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 116 750 - -
Acco13g1068 754 FunFam Cyclic nucleotide-gated ion channel 1 529 647 - -
Acco13g1068 754 Gene3D Helix hairpin bin 459 522 - -
Acco13g1068 754 SUPERFAMILY cAMP-binding domain-like 460 651 IPR018490 -
Acco13g1068 754 Gene3D - 140 456 - -
Acco13g1068 754 SMART cnmp_10 531 662 IPR000595 -
Acco13g1068 754 FunFam Cyclic nucleotide-gated ion channel 1 458 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1068 Acco-ChrAcco13 8694992 8700832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1068 27 754 Ion Channels AT2G23980 74.232 0.0 1127