Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1062 ATGCCGCTTCACAGTCCTACATCGGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCCTATGCGGCCATGCTCGAGCACCGTCACGCTCTCCGGCCTCCGCCGATTCGAACCCTCGATCGTCCTGTTCAACCAGAGGATAAACGACAAGGTCGTCATAAAAGTGAAGGACAATATGACGACGACGATGATGATGACGACGATGACAAGAAGAACCGTAAACGAGTCTGTAAAGAACCGTCTAGCGAGTTAAGGAATTGTAAACCTCCGGTTAAGGAGGCAGAGCCGCGAGAATCTACTTCAGAAACCCTAGTTATCTCCTCTTCGGTTGAATCGGTGATGGCTGATTTGCAGGCCAGCTCTGCTACGCAGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATCGACCTTCAACAAGTGTAAGAGAAACAGTCCAGGAAACTAAGAATCAGTCAGAAGATCGACTTGCACTGTCTATATGCCCAACTCCGTTGTCTACAGTATCACCATCTTCTGCTACACAACCTTTATCATCTATTCCTAGTACAACTCTACCAGAACAGAGCCTATCTCCTCAGAACGTTAGTAATGGACAAGTGCTGGGAGCAGGCAAGAAAATTTTTTCTGGCGGTAAAGCTTTTTCTGCTGTCAATGTTGCGAGGGCATCTGCATCTGATGGATACAACTGGCGCAAGTATGGTCAGAAGCAAGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCTTTCTGGGTGTAGTGCAAAGAAGATTGAATTTTGCGATAATTCAGGGCATATGATAGAGATTATTTATAAAGGTCAACACAGCCATGAACCACTACGGAAGACTAACTCTAACACCACTGGGGAAATCAAGTTCCTGCCATCTAATGAACCTACTGCTCAAGCGAATCTTCCAAAACAGCCCATTGGAGTGCCCAAGGATGCAGATCCAACCTCTTCTACAAAAGAACCTCTACAAGATTTATCATGCAGTGCTGATAAGAAACGGCAAAATTCATCCAGTCTTAGTGAGAATGGTAAATTTATTTTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAACAAGAGTGAAGAATGGTGACTTAACAAACTTGGACTCACATGTAGAACCTGGAAAGAATTCTAAGTATGTTTTGCATGCAGCAGGGGATGTTGGAATATCAGGTGATGGTTACCGATGGCGCAAGTATGGACAGAAAATGGTCAGGGGAAATTCCCATCCCAGAAATTACTACCGATGCACGTCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGACTGCAGTTGATGATCCTAGTGCTGTCATCATTACATATAAAGGAGCACACAACCATGACAAGCCTGTGCCCAAGAAACGACACAGCCCACCAAGTGCTTCTCCTGTAGCTGCTACCACCCCTGCCTCGTCAAACAATTTGCAACTCACGAATACTGATTCACAGCGAAACCAAGAAAATTCTGCTCAGTGGTCGGTGGACTCTGAAGAAGAATTAACTGAAGACGCCTCAGACCTTGGGGGTGAGAAAGCAATCGAGTCGGCTCGAACTCTCTTAAGCATGGGTGAAATCAAGCCTTGCTGA 1620 0.4568 MPLHSPTSDPIKRLSSLFRTIPYAAMLEHRHALRPPPIRTLDRPVQPEDKRQGRHKSEGQYDDDDDDDDDDKKNRKRVCKEPSSELRNCKPPVKEAEPRESTSETLVISSSVESVMADLQASSATQIDGRDESKEPNRPSTSVRETVQETKNQSEDRLALSICPTPLSTVSPSSATQPLSSIPSTTLPEQSLSPQNVSNGQVLGAGKKIFSGGKAFSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTLSGCSAKKIEFCDNSGHMIEIIYKGQHSHEPLRKTNSNTTGEIKFLPSNEPTAQANLPKQPIGVPKDADPTSSTKEPLQDLSCSADKKRQNSSSLSENGKFILKVEHVDEPELKTRVKNGDLTNLDSHVEPGKNSKYVLHAAGDVGISGDGYRWRKYGQKMVRGNSHPRNYYRCTSAGCPVRKQIETAVDDPSAVIITYKGAHNHDKPVPKKRHSPPSASPVAATTPASSNNLQLTNTDSQRNQENSAQWSVDSEEELTEDASDLGGEKAIESARTLLSMGEIKPC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1062 539 ProSiteProfiles WRKY domain profile. 396 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 MobiDBLite consensus disorder prediction 122 195 - -
Acco13g1062 539 MobiDBLite consensus disorder prediction 472 506 - -
Acco13g1062 539 Pfam WRKY DNA -binding domain 228 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 Pfam WRKY DNA -binding domain 403 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 ProSiteProfiles WRKY domain profile. 221 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 MobiDBLite consensus disorder prediction 70 101 - -
Acco13g1062 539 SUPERFAMILY WRKY DNA-binding domain 397 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 MobiDBLite consensus disorder prediction 30 110 - -
Acco13g1062 539 MobiDBLite consensus disorder prediction 140 195 - -
Acco13g1062 539 MobiDBLite consensus disorder prediction 454 521 - -
Acco13g1062 539 SMART WRKY_cls 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 SMART WRKY_cls 401 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 SUPERFAMILY WRKY DNA-binding domain 224 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 MobiDBLite consensus disorder prediction 285 309 - -
Acco13g1062 539 FunFam WRKY transcription factor 388 462 - -
Acco13g1062 539 MobiDBLite consensus disorder prediction 32 61 - -
Acco13g1062 539 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 171 494 IPR044810 GO:0003700
Acco13g1062 539 MobiDBLite consensus disorder prediction 283 348 - -
Acco13g1062 539 MobiDBLite consensus disorder prediction 325 348 - -
Acco13g1062 539 Gene3D WRKY domain 386 462 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco13g1062 539 Gene3D WRKY domain 213 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1062 Acco-ChrAcco13 8638340 8647846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1062 116 539 WRKY Transcription Factor Family AT4G30935 46.517 1.33e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco13g1062 WRKY 2.3e-24 CL0274