Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1049 ATGCAACAGCCAATCAACTCTTCTCCCTCTAATTCCTCCCCCATGAACTCTTCCCAAATTCCTCTTCACGACCAGATCCAACAACAACCTGACCTTCATGACGATTTTCTCGATCAAATGTTCTCTAACCTTCATTCCTTCTGGGACCCACAACTCAATCCCTCCGACGACAGCCACAATCACAATAATGGCGCCGCTTTCCACTACGACGACAAGTCGTTTCGCAACCACCACCAGATCCCTCCCGCCTCCACTACTCCACCGCCTCCTCCTCCTAAGTCTGCCGCCGCCGAGGCTGTCGCTTTGATGCTTCAGCGCCAGCTTCTCATGTCCAGAGGTGTTTCTGCCGACCCTGTCCTTCTTCAGATGCCCCTGTCTCTCGGTGCCGCCGGAGGAAACTTCGAGCCCTCCTGCAACGACGTCGCTGATGGTTCCTCCTTCAAATCTCACGTTCCGGCTGGCGACGGTACTGTCCAATCTCTGTACAACGGGCTTGCCGGATCTATGCACGACGATCAACAACCTTCCAACCAAACTCAACATTTCCATCATCCTCAGGGGCAGAATTATGGAGCAACAGGGCCGCCGGCGATGAACCAAGCCCCACAGAACGGAGCACCGGCGCAGCCGAAACAGAGGATTAGGGCGAGGAGGGGTCAGGCCACGGACCCACACAGTATCGCTGAGAGGTTAAGAAGGGAGAGAATCGCAGAGAGAATGAAGGCTCTGCAGGAACTGGTTCCCAATGGCAACAAGACGGACAAGGCGTCAATGCTGGACGAGATCATAGACTATGTCAAGTTCTTACAGCTCCAAGTGAAGGTTCTGAGCATGAGCAGATTGGGCGGCGCTGCTGCTGTTGCTCCTCTTGTTGCTGAGGGAGGAGGTGACTGCATTCAAACCGTCGCCGGTCGCAGCTCTAACGGCAACCAAACGGCGTCTTCCTCTGACGACACCCTCACCATGACGGAGCACCAGGTGGCCAAGCTCATGGACGAAGACATGGGCTCCGCCATGCAGTACCTTCAGGGTAAAGGTCTCTGCCTCATGCCCATCTCCCTCGCCACTGCCATATCCACCGCCACGTGTCCCTCGAGGAATCCCCTGATCCCCCCCGCCGCCGACAACAACAACCACCACCATCCGTCCGCGGTGTCCAACGGCAACGGAGGGGAAGGTCCGTCTTCTCCCATCATGTCGGTGCTGACCGTGCAGTCAGCCTCGGCGGCAAACGACGGCGCCGTTAAAGATGCGGCCTCCGTTTCGAAGCCGTGA 1275 0.5694 MQQPINSSPSNSSPMNSSQIPLHDQIQQQPDLHDDFLDQMFSNLHSFWDPQLNPSDDSHNHNNGAAFHYDDKSFRNHHQIPPASTTPPPPPPKSAAAEAVALMLQRQLLMSRGVSADPVLLQMPLSLGAAGGNFEPSCNDVADGSSFKSHVPAGDGTVQSLYNGLAGSMHDDQQPSNQTQHFHHPQGQNYGATGPPAMNQAPQNGAPAQPKQRIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAEGGGDCIQTVAGRSSNGNQTASSSDDTLTMTEHQVAKLMDEDMGSAMQYLQGKGLCLMPISLATAISTATCPSRNPLIPPAADNNNHHHPSAVSNGNGGEGPSSPIMSVLTVQSASAANDGAVKDAASVSKP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1049 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 269 IPR011598 GO:0046983
Acco13g1049 424 SMART finulus 226 275 IPR011598 GO:0046983
Acco13g1049 424 MobiDBLite consensus disorder prediction 163 207 - -
Acco13g1049 424 MobiDBLite consensus disorder prediction 369 404 - -
Acco13g1049 424 MobiDBLite consensus disorder prediction 163 224 - -
Acco13g1049 424 MobiDBLite consensus disorder prediction 75 95 - -
Acco13g1049 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 218 280 IPR036638 GO:0046983
Acco13g1049 424 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 358 - -
Acco13g1049 424 FunFam Transcription factor bHLH66 217 282 - -
Acco13g1049 424 Pfam Helix-loop-helix DNA-binding domain 225 270 IPR011598 GO:0046983
Acco13g1049 424 MobiDBLite consensus disorder prediction 1 26 - -
Acco13g1049 424 MobiDBLite consensus disorder prediction 379 404 - -
Acco13g1049 424 Gene3D - 215 277 IPR036638 GO:0046983
Acco13g1049 424 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1049 Acco-ChrAcco13 8529686 8532775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1049 206 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 64.706 1.11e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco13g1049 HLH 1.1e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1049 13 8529686 8532775 Acco13g1049 13 8529686 8532775 ECH