Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1023 ATGCGCAAAGACACATTCCTTTCTGAAGTAATCATGGAGGAGGTTATTTATGAAGATCTCCCATCGAACTTATGTGCAATAAGAGATTACTTAGAGAACAGAGAGGCATCCAGTTCATCAGAGGAGAGCGGCTTCTTGTTTATCGTCACCTGTCTCCTGCAGCCGAAAATGCCTTCCCACAAGACCTTCAGGATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCCATCCCTTACTGGATTCGAATGAGGACTGACAATACCATAAGGTATAATGCTAAGCGCAGGCACTGGCGCCGCACCAAGCTCGGATTTTAA 324 0.466 MRKDTFLSEVIMEEVIYEDLPSNLCAIRDYLENREASSSSEESGFLFIVTCLLQPKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1023 107 FunFam 60S ribosomal protein-like L39 57 107 - -
Acco13g1023 107 Hamap 50S ribosomal protein L39e [rpl39e]. 57 107 IPR000077 GO:0003735|GO:0005840|GO:0006412
Acco13g1023 107 ProSitePatterns Ribosomal protein L39e signature. 86 102 IPR020083 GO:0003735|GO:0005840|GO:0006412
Acco13g1023 107 Gene3D Ribosomal protein L39e 57 107 IPR023626 -
Acco13g1023 107 SUPERFAMILY Ribosomal protein L39e 59 106 IPR023626 -
Acco13g1023 107 PANTHER RIBOSOMAL PROTEIN L39E 49 107 - -
Acco13g1023 107 Pfam Ribosomal L39 protein 65 105 IPR000077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1023 Acco-ChrAcco13 8294433 8296737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1023 57 107 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 5.31e-30 100