Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1014 ATGATAAAGCAAAAGCAAAGTCTCTTTTTGACCCCAATTGGAGAAAGAGATCAGCCATCAAATTCTGCTTTTTCTTTTTCTGAAATCTTAAAAAGATGTGAAGTTGATGAAGTGCCCAAGGCCACACGGATTGCTAGCTATTCCAATTTAGCCGAAAGTGTTGAAGCATTTTACACAAAGGAGACAAAGGCAATAGCAACAGATTGTCCCTCTCTCTTTCTCTTTGGGGCTCTTCAAGTTCCAATGGAGATTTTTAAAGGTTTCTACTTCAACCTCCTTCTTGTTGCCACTTTTTCCATTTTCTTCTTGGCTGTTTCAGCAATGGACCCTTCTTCTGATGCACTCATAAGCCTGAAATCTGAACTTGTGGATGATGAAGACAGTTTAAGTGACTGGGTGGTTGAGCCTTCTGGAGGAAACTCAACTGGGAAATCCAATGCTTATTTCTGTTCTTGGACTGGAATCACGTGTGATAATAGCTCAAAAACTGTGACTTCCATAGATTTGTCCATGAAGAAACTGGGAGGCGTAATGTCAGGGAAGCAATTCAGTGTCTTCACAAAGCTTGAGTATCTCAACCTCAGCCATAATTTCTTCTCTGGGCAACTTCCTGCGGGAATCTTCAACCTCACCAGTCTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCTGGTCAGTTCCCAGGTGGGATATCAAGCCTTAAAAACTTGCTTGTATTTGATGCTTTCAGCAACAGCTTTTCTGGGCCGTTGCCTGCTGAACTTTCTAAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTAGAGTTTCTTCATCTTGCAGGGAATCTTCTCTCTGGGAATCTACCTCCAGAATTGGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCAGGGTTTTATTCCACCTGAGTTTGGTAACATGAGTGAACTTAGGTATCTTGATATTGCTGGGGCAAATCTATCTGGCCCAATACCAAAGCAACTCTCCAATCTCACCAATGTGCAGTCACTTTATCTGTTCAGAAACCAGCTCATGGGATCAATTCCAAGTGAGTTTAGCAATATCACGTCACTCACGGATTTAGATCTTTCTGATAATTTCATTTCTGGGCCCATTCCTGAAAGCTTCTCAAAGTTAGAGAACCTGAGGCTGCTCAGTCTCATGTATAATGACATGAATGGCACAGTTCCTGAAGGCATTGCACAACTTCCAAACTTAGAAACTCTTCTTATTTGGAACAATGACTTCTCTGGTTCACTTCCACAGAGTTTAGGCAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAACAATTTTGTAGGCAGTATACCACCAGCCATTTGTATGAGAGGGGTATTATATAAGCTGATTCTGTTTTCAAACAGATTCTCAGGTAGCCTCTCACCATCTCTCTCAAATTGTTCATCACTCGTTCGTCTTCGCTTGGAAGATAACTTGTTCACTGGGAATATCCCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACCTATCCAGGAATAAATTCCTTGGTGGGATCCCCTCAGATATTTCCCAAGCTATCAGGCTTGCTTACTTCAATGTCTCCAATAATCCACAATTAGGAGGCACCATCCCTCCGCAAACATGGTCTTTGCCACTTCTGCAAAATTTGTCAGCCTCTTTCTGTGGTATTTCAGGAAAACTTCCCCCATTTGAGTCCTGCAAATCAGTCTCTAGCATTGACCTTGATACGAATAACTTGTTCGGAACGATCTCATTCACTATTTCAAATTGCAAAAATCTTGAGATCATAAAATTGTCCGACAATAATTTATCTGGTCCTATACCTGATCAGCTTACAAGCATCCCTGTCCTTGGTGTAGTAGACCTATCACACAATAACCTCAGTGGCCCTATACCTGCAAAGTTTAGCACTTGTTCAAGCTTACAACTTCTTAATGTGTCATTCAACTATATCTCCGGTTCGATTCCCGAAGGAAAGTTATTCAAATTCATGGATACCAGTGCATTTGTTGGGAATCCAGAGCTATGCGGATCACCTCTACGACCATGTTCTGATTCAGTAGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTGTAGTGCTATTGTGTGCAGGATTGCTTATATTCCTTGTTGCAGCATTAGCTTTTGGAATAGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATCTCATTTGTTGGTCTCCCTCAGTTCACAGCAAACGATGTTTTGACAAGCTTCAATACCACAGAATCAAGAGAAGTGGCAGCAAAACCATCACCTTCAGTTTCAAAAGCTGTTTTGCCAACTGGAATTACAGTTTTGGTGAAGAAGATTGAGTGGGAAAAGAGGAACATTAAAGTGGTGTCAGAGTTTATAATGAGACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGCTATAACCAGAGTCTAGCTTATATGTTATATGACTACTTACCTAATGGGAACTTGGCTGAGAAAATTGGGATGAAAAGGGATTGGGAAGCTAAATTCAGAATTGTGATTGGCATTGCCAAGGGACTTTGCTTCCTTCACCATGACTGTTACCCAGCCATACCACATGGAGACTTGAAATCTAGCAATGTAGTATTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAGCATGTGTTGAAGTTGAGCAAAGGTTCATCTCCTTCCAGAACTTCTAGCTGGGAACCAGAATACAATGAAGCCATGAAAGAGGAATTCTACGCCGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTTTAACTAATGGAAGGCTGAAAAAGGCAGCAGCTAGCACACAAAACAAACCAAGAGAGGTTCTTTTGAGAGAAATTTATGATGAAAATGATGTGAGTTCTGCCAGTTCATTGCAAGAGATCAAACTGGTTCTTGAAGTGGCTTTGCTTTGCACCAGAAGCAAGTCATTTGATCGCCCATCCATGGAAGATGCTTTGAAGCTTTTGTCAGGGTCGAAGGCTCCAGAAGATCACAAATATTAA 3135 0.4089 MIKQKQSLFLTPIGERDQPSNSAFSFSEILKRCEVDEVPKATRIASYSNLAESVEAFYTKETKAIATDCPSLFLFGALQVPMEIFKGFYFNLLLVATFSIFFLAVSAMDPSSDALISLKSELVDDEDSLSDWVVEPSGGNSTGKSNAYFCSWTGITCDNSSKTVTSIDLSMKKLGGVMSGKQFSVFTKLEYLNLSHNFFSGQLPAGIFNLTSLRSLDISRNNFSGQFPGGISSLKNLLVFDAFSNSFSGPLPAELSKLENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYQGFIPPEFGNMSELRYLDIAGANLSGPIPKQLSNLTNVQSLYLFRNQLMGSIPSEFSNITSLTDLDLSDNFISGPIPESFSKLENLRLLSLMYNDMNGTVPEGIAQLPNLETLLIWNNDFSGSLPQSLGKNSNLMWVDVSTNNFVGSIPPAICMRGVLYKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGNIPLKFRHLPDISYVDLSRNKFLGGIPSDISQAIRLAYFNVSNNPQLGGTIPPQTWSLPLLQNLSASFCGISGKLPPFESCKSVSSIDLDTNNLFGTISFTISNCKNLEIIKLSDNNLSGPIPDQLTSIPVLGVVDLSHNNLSGPIPAKFSTCSSLQLLNVSFNYISGSIPEGKLFKFMDTSAFVGNPELCGSPLRPCSDSVGILGSKGTWKLTSVVLLCAGLLIFLVAALAFGIVYFRRGVKSQWKMISFVGLPQFTANDVLTSFNTTESREVAAKPSPSVSKAVLPTGITVLVKKIEWEKRNIKVVSEFIMRLGNARHKNLIRLLGFCYNQSLAYMLYDYLPNGNLAEKIGMKRDWEAKFRIVIGIAKGLCFLHHDCYPAIPHGDLKSSNVVFDENMEPHLAEFGLKHVLKLSKGSSPSRTSSWEPEYNEAMKEEFYADVYKFGEMILEILTNGRLKKAAASTQNKPREVLLREIYDENDVSSASSLQEIKLVLEVALLCTRSKSFDRPSMEDALKLLSGSKAPEDHKY 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1014 1044 FunFam Leucine-rich repeat receptor-like protein kinase 108 276 - -
Acco13g1014 1044 FunFam Leucine-rich repeat receptor-like protein kinase TDR 277 381 - -
Acco13g1014 1044 SMART LRR_typ_2 282 306 IPR003591 -
Acco13g1014 1044 SMART LRR_typ_2 186 210 IPR003591 -
Acco13g1014 1044 SMART LRR_typ_2 426 450 IPR003591 -
Acco13g1014 1044 SMART LRR_typ_2 378 401 IPR003591 -
Acco13g1014 1044 SMART LRR_typ_2 354 377 IPR003591 -
Acco13g1014 1044 SUPERFAMILY L domain-like 395 711 - -
Acco13g1014 1044 Gene3D Ribonuclease Inhibitor 375 469 IPR032675 -
Acco13g1014 1044 FunFam Leucine-rich repeat receptor-like protein kinase TDR 399 713 - -
Acco13g1014 1044 FunFam Leucine-rich repeat receptor-like protein kinase TDR 856 1041 - -
Acco13g1014 1044 Gene3D Ribonuclease Inhibitor 470 715 IPR032675 -
Acco13g1014 1044 Pfam Leucine rich repeat 380 438 IPR001611 GO:0005515
Acco13g1014 1044 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Acco13g1014 1044 Gene3D Transferase(Phosphotransferase) domain 1 854 1043 - -
Acco13g1014 1044 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 260 1027 - -
Acco13g1014 1044 Gene3D Phosphorylase Kinase; domain 1 760 853 - -
Acco13g1014 1044 Pfam Protein tyrosine and serine/threonine kinase 802 1031 IPR001245 GO:0004672|GO:0006468
Acco13g1014 1044 FunFam Leucine-rich repeat receptor-like protein kinase TDR 770 855 - -
Acco13g1014 1044 Gene3D Ribonuclease Inhibitor 109 275 IPR032675 -
Acco13g1014 1044 Gene3D Ribonuclease Inhibitor 276 374 IPR032675 -
Acco13g1014 1044 Pfam Leucine rich repeat N-terminal domain 111 158 IPR013210 -
Acco13g1014 1044 SMART serkin_6 770 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1014 1044 ProSiteProfiles Protein kinase domain profile. 735 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1014 1044 SUPERFAMILY Protein kinase-like (PK-like) 794 1033 IPR011009 -
Acco13g1014 1044 SUPERFAMILY RNI-like 166 488 - -
Acco13g1014 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1014 Acco-ChrAcco13 8235160 8242332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1014 100 1034 Receptor kinase-like Gene Family AT5G51350 56.131 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco13g1014 PK_Tyr_Ser-Thr 1.2e-19 CL0016