Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0999 ATGGCCGGAAATCTCCCCGGAGTAGAGTGTGCTCGAAGGAGAAGGTTTCATCAAAGTGGAGTATGGTCTGATTCACCATCCTCCATGGGTCCTCATACTTGCACTAGACGCTCTTCTTTCTGCTTGTACACTAGCAACCATGAATCTCTTTCTTCTTCCTCTTTACTGCAAAGAAGCTTGGTACATCAGGCATACCCACATGAAATGCTGGGAGGGGCAGCTAGAGAAGCCAAACGGAGATTGGATGAGAGATTAGGAACACAGAGGAAAACAGAGATTAAAAGTAAGCAGAAGAATGGAGAGGTGAGGAGTGAAGCAGACTTGCAGATAGAAATATATGGGGCGAAGAAAAATGGAAGCAGGAGATTCATTTGGAGTAAATTGAGCTGGAAGGCAACAGAACAAGAGGAATGTGCAGTGTGCTTAGAATCATTCAAAAATGGTGACACACTCATAAATCTTCCATGTGCAGACAAGTTCCACTCAAGGTGTTTGAAGCCATGGCTGCAAAATAATTCTCACTGTCCTTGTTGCAGAACCACCATCATCAATATTTCTCACTAG 564 0.4397 MAGNLPGVECARRRRFHQSGVWSDSPSSMGPHTCTRRSSFCLYTSNHESLSSSSLLQRSLVHQAYPHEMLGGAAREAKRRLDERLGTQRKTEIKSKQKNGEVRSEADLQIEIYGAKKNGSRRFIWSKLSWKATEQEECAVCLESFKNGDTLINLPCADKFHSRCLKPWLQNNSHCPCCRTTIINISH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0999 187 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF103 88 180 IPR042494 GO:0004842|GO:0016567
Acco13g0999 187 FunFam Zinc finger family protein 112 184 - -
Acco13g0999 187 ProSiteProfiles Zinc finger RING-type profile. 138 179 IPR001841 -
Acco13g0999 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 185 IPR013083 -
Acco13g0999 187 SUPERFAMILY RING/U-box 125 184 - -
Acco13g0999 187 Pfam Ring finger domain 137 179 IPR001841 -
Acco13g0999 187 CDD RING-H2_PA-TM-RING 137 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0999 Acco-ChrAcco13 8079706 8080467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0999 1 85 C3H Transcription Factor Family AT2G15580 50.000 2.45e-18 74.7