Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0993 ATGGCAGATTGGTACTATGAGCCCCCGAATCTTCTCTCTCTCTCCATAAGCCACAAAATTCCATTAAAGTTTATTGCGTTTTTGGCCTACAAGTTGCTGCTGAGCCGAACCACTACCACCTTCATCACCGACTCTGCTTGTTGTGTCAGCATGTGTTTACAGGACGCCGATCAAGTTGGCGCCAATATGGAGAACCCAGATGATACAAGAATGTCTTGGCCCTTGCATTGCGACCTCTTGCATACCCACATGGAAAAGGAACCTCCTTTTAGAACTTCCGATGATCGGAGTTTCTGTTTTGGGGATTCATTTCCGCTGGAAAGCATAAATGAGGACACAGTGATTGCAGACAAAAAACAGAACCAGATGAACTTTGCCCCTACTCTGCGATCTGGAGAGTGGTCCGATATCGGAGGTCGCCCCTATATGGAAGATACTCACATCTGTATTGGAGACTTAGGAAAAAAGTTTGGTTATGATGTACTCAGTAAGGAAGTTATTTCCTTTTATGGGGTATTTGATGGACATGGAGGGAAGAGCGCTGCACTATTTGTCCGTGATCATCTTCCAAGAGTTGTTATTGAGGATGCTGATTTTCCTGTGGAGCTGGAGAAGGTAGTCACAAGGTCATTTTTACAGACAGATGCTGCATTTGCTGAGACATGTTCCCTTGAGTCTTCATTGTCTTCTGGTACAACTGCATTAACTGCAATCATTTTTGGGAGGTCTTTGCTAGTGGCCAATGCTGGAGATTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCGATAGAGATGTCCAAAGATCATAGGCCCTTGTGCATGAAAGAGAAGAAGCGGATTGAATCTCTAGGTGGATACATCGATGACGGTTATCTAAATGGCCAGTTAGGCGTGACACGGGCACTAGGTGACTGGCATCTCGAGGGTTTGAAGGAAATGAGCGAAAGAGGAGGGCCCTTAAGTGCTGAGCCAGAACTCAAACTTACCACACTGACCAAAGAGGATGAGTTTCTGATAATTTCAAGTGATGGGATCTGGGATGTTTTCAGCAGCCAAAATGCCGTGGATTTTGCAAGGAGGCGGCTTCAGGAACATAATGATGTGAAACTATGCTGTAAAGAGATGGTGGAGGAAGCCTTAAAGAGGGATTCGACCGATAACTTAACTGTTGTGATGGTGTGTTTTCACTCAGAACCACCACCTCCTGTGGTGGTACAGAGGCCAAGATTCAGAAGAAGCATATCTGCTGAGGGACTTCAGAATCTCAAGTCCTGCCTGGAAGGATAG 1287 0.4592 MADWYYEPPNLLSLSISHKIPLKFIAFLAYKLLLSRTTTTFITDSACCVSMCLQDADQVGANMENPDDTRMSWPLHCDLLHTHMEKEPPFRTSDDRSFCFGDSFPLESINEDTVIADKKQNQMNFAPTLRSGEWSDIGGRPYMEDTHICIGDLGKKFGYDVLSKEVISFYGVFDGHGGKSAALFVRDHLPRVVIEDADFPVELEKVVTRSFLQTDAAFAETCSLESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRRGRAIEMSKDHRPLCMKEKKRIESLGGYIDDGYLNGQLGVTRALGDWHLEGLKEMSERGGPLSAEPELKLTTLTKEDEFLIISSDGIWDVFSSQNAVDFARRRLQEHNDVKLCCKEMVEEALKRDSTDNLTVVMVCFHSEPPPPVVVQRPRFRRSISAEGLQNLKSCLEG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0993 428 CDD PP2Cc 130 395 IPR001932 -
Acco13g0993 428 FunFam Probable protein phosphatase 2C 22 114 398 - -
Acco13g0993 428 Pfam Protein phosphatase 2C 142 387 IPR001932 -
Acco13g0993 428 SMART PP2C_4 120 393 IPR001932 -
Acco13g0993 428 PANTHER PROTEIN PHOSPHATASE 2C 117 393 IPR015655 GO:0004722|GO:0006470
Acco13g0993 428 Gene3D - 111 399 IPR036457 -
Acco13g0993 428 ProSiteProfiles PPM-type phosphatase domain profile. 130 395 IPR001932 -
Acco13g0993 428 ProSitePatterns PPM-type phosphatase domain signature. 169 177 IPR000222 GO:0043169
Acco13g0993 428 SUPERFAMILY PP2C-like 123 397 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0993 Acco-ChrAcco13 8040620 8044368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0993 119 428 PP2C-type Phosphatase Gene Family AT2G25620 60.897 1.25e-137 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Acco13g0993 PP2C 1.5e-64 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0993 13 8040620 8044368 Acco13g0993 13 8040620 8044368 ECH