Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0975 ATGGGTAACAAAAAGAAACAAGTTGGAGACAACAGTTGCAAAGCTTATGATAAGGATACTGAGGTATTTATTTCCACGTCTCAAGAGTTAAAGATAGAAGGGAACAGGCTGTTCCAAAAGAGGGATCATGAAGGGGCCATCTTAAAATATGAGAAAGCCATTAAATTGCTACCTAGAAACCATATAGATGTGTCTTGTCTTCGGAGTAACATGGCGGCTTGCTACATGCAGATGGGATTCAGCGAGTACCCGAGGGCCATTCATGAATGCAATTTAGCTCTTGAAGTTACTCCAAAGTACAGCAAAGCCCTTTTGAAGAGGGCAAGGTGCTATGAGGCTTTAAATAGACTAGATTTAGCTCTGAGAGATGTTAGTAATGTACTGAAGACGGAGCCAAACAATGTTATGGCGTTGGAAATTTCGGAGAAGGTGAAAAATTCACTCGACGAGAAGGGATTAAAAGTAGCTGATATAGCAATTGAGTTGCCTTCTGATCATGCTGAACCTGTGCCTCCAGAGGTAGTAAAAGAGAAGAAACACAAGAAGAGCAAAAAGGTTGAGAAGCTTGTTGAGGAGAAGTTGGAAGACAAGAGGTTGAAGGATATTGTTGAGCAGAAGAAGGCTGTGAACAAATCCAGAGAGAAGTTGGAAGACAAGGAGGACGAGAACAATGTTGAGCCGAGGAACTCTGTGAACAAGGCGACCAAGGAAAAGATTAACGAGAAGAAGGCTGATATAAAGGAGGTTGTTGAGGAAAAGCTTAATCTTAGAAAGGAAGAGGCGGCTAAGAAAATAGTGAAACTTATTTTTGGCGAGGACATTAGATTGGCAGAATTACAGGTCAATTGCAACCTCCAACATCTAAGGAATGTTATCAGCGACCGATTTCCTAGCCTGGGAGCGGTTCTTGTCAAATACAAGGATGAAGAAGGTGATTTAGTCACAATCACTTCTGATGAAGAATTGAGATGGTCTGAAACATCAATAGGATCAGAGGGTTGTATCCGCCTATACATAGTGAATGCTGATCCTAAGCAGGATCCATTGTTTGAGAAAATTGATGAAAAGAAGAAGCAAAATCGTGTCAATAATGATGCACTTGAGAATGGTTGTGTGGTAAAAGAAAAGGAAATGATTAGGTCATCTTGTATTGAGGATTGGATAATCCAGTTTGCCCAACTTTTCAAGAACCATGTTGGAATTGGATCTGACAGATATTTAGATTTTCATGAACTTGGAATGAAACTCTATTCTGAGGCTATGGAGGAGACAGTTACCGGTGAAGAAGCACAAAGCCTGTTTGACATGGCAGGAGCTAAGTTTCAAGAAATGGCTTCCTTAGCATTGTTCAACTGGGGAAATGTTCACATGTCCAGGGCAAGGAAGAAAGTGAATTTCACAGAAGAATCTTCTAAAGAGAATCTTCATGAACAGATAAAAAACTCATATGAATGGGTGCAGCAAGAATATAAAACAGCAGGAGAAAAATATGAAGCCGCCATTAAAATCAAACCTGATTTTTATGAAGGCTTTTTGGCACTAGGCCAACAGCAGTTTGAGCAAGCAAAACTGTCTTGGTATTATGCAATTAACACACAAGTTGACTTAGCAACATGGCCCTCCGCCGAGATTCTTCAACTTTACAACAATGCCGAGGAAAACATAGAGAAAGGAATGCATATATGGGAACAATTAGAAAATCGATGCTCAAATGAAGATTCTAAATCAAAGGATATCAAATTCCATTTACAGAATATGGGATTGGATTGCATATTGCAGAATATATCACCTGAAGAAGCAGCAGCACAGGCAGCAACTTTGAGGTTTCAAATAAATATCCTTTGGGGTACAATGTTATATGAACGTTCAATCATGGAATTCAAATTAGGGCTACCAGTATGGCATGAATGTCTGGAAGTTGCAGTAGATAAGTTTGAACTTGCTGGAGCTTCTCCAACAGACATAGCTGTAATGTTGAAGAACCATTGTTCAAATAATACTAGTGCTGAAGGTCTAGGATTCAATATTGATGAAATAGTACAAGCATGGAATGAGATGTATGAAGCCAGAAGGTGGCAGAGTCGAGTTTCGTCATTTCATTTGGAAGCCTTATTCAGAAGGCGAACTTCAAAAATCTATCATGCCTTGGAGCTTGCGTGA 2160 0.3977 MGNKKKQVGDNSCKAYDKDTEVFISTSQELKIEGNRLFQKRDHEGAILKYEKAIKLLPRNHIDVSCLRSNMAACYMQMGFSEYPRAIHECNLALEVTPKYSKALLKRARCYEALNRLDLALRDVSNVLKTEPNNVMALEISEKVKNSLDEKGLKVADIAIELPSDHAEPVPPEVVKEKKHKKSKKVEKLVEEKLEDKRLKDIVEQKKAVNKSREKLEDKEDENNVEPRNSVNKATKEKINEKKADIKEVVEEKLNLRKEEAAKKIVKLIFGEDIRLAELQVNCNLQHLRNVISDRFPSLGAVLVKYKDEEGDLVTITSDEELRWSETSIGSEGCIRLYIVNADPKQDPLFEKIDEKKKQNRVNNDALENGCVVKEKEMIRSSCIEDWIIQFAQLFKNHVGIGSDRYLDFHELGMKLYSEAMEETVTGEEAQSLFDMAGAKFQEMASLALFNWGNVHMSRARKKVNFTEESSKENLHEQIKNSYEWVQQEYKTAGEKYEAAIKIKPDFYEGFLALGQQQFEQAKLSWYYAINTQVDLATWPSAEILQLYNNAEENIEKGMHIWEQLENRCSNEDSKSKDIKFHLQNMGLDCILQNISPEEAAAQAATLRFQINILWGTMLYERSIMEFKLGLPVWHECLEVAVDKFELAGASPTDIAVMLKNHCSNNTSAEGLGFNIDEIVQAWNEMYEARRWQSRVSSFHLEALFRRRTSKIYHALELA 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0975 719 ProSiteProfiles TPR repeat profile. 101 134 IPR019734 GO:0005515
Acco13g0975 719 SMART tpr_5 101 134 IPR019734 GO:0005515
Acco13g0975 719 SMART tpr_5 27 60 IPR019734 GO:0005515
Acco13g0975 719 SMART tpr_5 65 100 IPR019734 GO:0005515
Acco13g0975 719 Gene3D Tetratricopeptide repeat domain 25 155 IPR011990 GO:0005515
Acco13g0975 719 Gene3D - 249 341 - -
Acco13g0975 719 ProSiteProfiles PB1 domain profile. 263 342 IPR000270 GO:0005515
Acco13g0975 719 Coils Coil 199 222 - -
Acco13g0975 719 SUPERFAMILY TPR-like 16 139 IPR011990 GO:0005515
Acco13g0975 719 SUPERFAMILY CAD & PB1 domains 264 328 - -
Acco13g0975 719 Pfam PB1 domain 266 340 IPR000270 GO:0005515
Acco13g0975 719 ProSiteProfiles TPR repeat profile. 27 60 IPR019734 GO:0005515
Acco13g0975 719 PANTHER PROTEIN CLMP1 5 717 IPR044517 -
Acco13g0975 719 CDD PB1 265 339 - -
Acco13g0975 719 MobiDBLite consensus disorder prediction 210 230 - -
Acco13g0975 719 SMART PB1_new 263 342 IPR000270 GO:0005515
Acco13g0975 719 Coils Coil 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0975 Acco-ChrAcco13 7853472 7855715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0975 10 134 Calmodulin-binding Proteins AT3G25230 32.117 2.11e-09 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0975 13 7853472 7855715 Acco13g0975 13 7853472 7855715 ECH