Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0959 ATGGCCATCCTTACATTATTCTTGGCGCTATTGCTGCAACTGCCTTGCATTTTCGCCACCGGTTCTTTCTTACACTCAACTGATTGTGGTCCTAATTGGGTAGCCTACTCATATTCACTTGGAGAAGAATTTTATTACTTAAACGAGAATATAGTGGACAAAGTTACTTTCTGCAAGACCCTCCAACTGTATATTGCAAATGGTTGTGATTTGAAGGGCTACTTTGAAAGTAGCAACTGTGCCTTGGATGTTGTTGAAGTTAATTCACCTTCAAAGGCAGGAAGAAAACTTCTGCAGAAGGATTTAAACAACAATTCCACATCTCAATCTCACCAAAATGTTACAAAGAATGTGTCATTATCTCATGTTGGGATAGCTGCATGTGGAGCTTTCTTGGTATGTTGTGGAGCTATCTGTCCTTGTATCTATGGGAAGAGACGAAAAGACGCTCCTCATGCTGATTTGACCAAGGACACACATTCAATTGATTCGGCTTCCCCCTTTGAAGTAAATGCTGTTTCTGAAAAGGTGCCTGGAAGTCCACTACGTGTGCCACCTAGTCCTTCAAGATTTTCGTTGTCCCCAAAACTCAGTAGAATTGGGTCATTACATCTTAACTTGAGTCAAATTATAAAAGCTACCCATAATTTCTCAGATACTTTAAAAATAGGAGAAGGTGGTTTTGGAACTGTCTACAGGGCTCAGCTTGAAGATGGATCGGTTGTGGCTGTGAAACGTGCAAAAAGGGAACTTTTTGAGACGTTGAGAACTGAATTCAGCAGTGAGGTTGAAATCCTGGCCAAAATTGATCATCGAAACTTGGTGAAGCTAGTAGGTTACATTGACCAAGGAAAGGAACGCCTTCTTATTACTGAGTATGTGGCAAATGGTTCTCTTAGAGAACATTTGGATGGTCTACGTGGAAATATCCTAGATTTCAATCAGCGCCTTGAAATTGCTATTGATGTTGCTCATGGATTGACCTATCTGCATACCTATGCAGAAAAGCAGATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTAACAGAAAGCATGAGAGCCAAAGTTGCAGATTTTGGATTTGCAAAGATCGGTCCCACAAGCACCGATCAGACACACGTTTCAACCAAAGTGAAAGGAACAGTTGGTTATTTGGATCCTGAGTACATGAAAACATTTCAACTCACTTCCAAGAGTGACGTTTACTCATTTGGAATTTTGCTCCTAGAAATTGTGTCAGGCCGCCGTCCGGTGGAGTTGAAGAAACCAGCTGAAGATCGGGTTACATTACGATGGGCGTTCAGGAAGTTCCATGAAGGAAATGTGCTGGCACTGCTGGATCCTGCAATGAGGGAAAGTGTGAAGACAGAGGTTGTCATGAAGATGATTGAGTTGGCATTTCAATGCGCAGCAGCCCCGGTCCGAGCGGATCGACCCGACATGAAATCAGTGGTCCAGCAATTGTGGACCATAAGAGCAGACTACCTCAAGGGTGCAAGGAGATCCTAG 1515 0.4264 MAILTLFLALLLQLPCIFATGSFLHSTDCGPNWVAYSYSLGEEFYYLNENIVDKVTFCKTLQLYIANGCDLKGYFESSNCALDVVEVNSPSKAGRKLLQKDLNNNSTSQSHQNVTKNVSLSHVGIAACGAFLVCCGAICPCIYGKRRKDAPHADLTKDTHSIDSASPFEVNAVSEKVPGSPLRVPPSPSRFSLSPKLSRIGSLHLNLSQIIKATHNFSDTLKIGEGGFGTVYRAQLEDGSVVAVKRAKRELFETLRTEFSSEVEILAKIDHRNLVKLVGYIDQGKERLLITEYVANGSLREHLDGLRGNILDFNQRLEIAIDVAHGLTYLHTYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKIGPTSTDQTHVSTKVKGTVGYLDPEYMKTFQLTSKSDVYSFGILLLEIVSGRRPVELKKPAEDRVTLRWAFRKFHEGNVLALLDPAMRESVKTEVVMKMIELAFQCAAAPVRADRPDMKSVVQQLWTIRADYLKGARRS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0959 504 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 91 495 - -
Acco13g0959 504 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Acco13g0959 504 Gene3D Transferase(Phosphotransferase) domain 1 294 501 - -
Acco13g0959 504 CDD STKc_IRAK 223 490 - -
Acco13g0959 504 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 294 504 - -
Acco13g0959 504 SUPERFAMILY Protein kinase-like (PK-like) 199 494 IPR011009 -
Acco13g0959 504 Gene3D Phosphorylase Kinase; domain 1 190 293 - -
Acco13g0959 504 Pfam Protein tyrosine and serine/threonine kinase 222 490 IPR001245 GO:0004672|GO:0006468
Acco13g0959 504 ProSiteProfiles Protein kinase domain profile. 217 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0959 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Acco13g0959 504 SMART serkin_6 217 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0959 Acco-ChrAcco13 7723648 7728447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0959 123 490 Receptor kinase-like Gene Family AT3G46290 39.892 3.39e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Acco13g0959 PK_Tyr_Ser-Thr 2.4e-51 CL0016