Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0937 ATGGTCGTCAGACAAATTTCACTTTCTTTCTCACGGCTTCAGAATAAAATTAGTCACCTCATGGAAAGCAAAGAAATGGCACTGAAGCCACAGCCCAAAAAGAATCTATGGAAGCCTGAGGAGGACGTGGTTCTGAAAACATACATTGAAGCTCACGGTGAAGGAAACTGGGAAGCAGTTTCCAGAAATTCAGGTCTGAATAGAGGAGGGAAGAGTTGCAGGCTAAGATGGAAGAACTATTTGAGACCAGACATTAAACGCGGAGGAATGTCTGAAGAAGAAGAAGACCTTATCATCAGACTCCATAAGCTTCTTGGCAACCGATGGTCACTGATAGCTGGAAGAATCCCTGGTAGAACCGATAACGAAGTGAAGAATTACTGGAATACCCATTTGAACAAGAGATGCCCTCGAGGCAAAAGGAAATCCATCGATTCAAACGATGACGATCAAGAAACCAGCAAGAAACAACAAATCAGCAAGTCCGACTTCCCTGTTTCCGCAAGCATCGTAGAGACAGGGTTGTTAGATGCGAGGAAAGAAGAGAACAGTAACATCACAAGCTCTGGGATCGACGAATTGCAGAGCTTCCACTGTGAACTAGATTTTCCGATTGTGCCTGGGAACAGTGCGGTATTTGGTTCCGACGATGAGCCTTTCACGACGAATTTGGATTCCATTCTCCTGTTTGAAACTGAGGCTTTAGACTATGGTTGGTTGGAGTCCAGTTCGCACAATCAATGCTTCATGCCATGGTGGGAATAG 765 0.4484 MVVRQISLSFSRLQNKISHLMESKEMALKPQPKKNLWKPEEDVVLKTYIEAHGEGNWEAVSRNSGLNRGGKSCRLRWKNYLRPDIKRGGMSEEEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEVKNYWNTHLNKRCPRGKRKSIDSNDDDQETSKKQQISKSDFPVSASIVETGLLDARKEENSNITSSGIDELQSFHCELDFPIVPGNSAVFGSDDEPFTTNLDSILLFETEALDYGWLESSSHNQCFMPWWE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0937 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 81 IPR017930 -
Acco13g0937 254 Gene3D - 36 86 - -
Acco13g0937 254 FunFam MYB-related transcription factor 33 86 - -
Acco13g0937 254 Pfam Myb-like DNA-binding domain 87 132 IPR001005 -
Acco13g0937 254 Pfam Myb-like DNA-binding domain 35 81 IPR001005 -
Acco13g0937 254 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 29 177 - -
Acco13g0937 254 CDD SANT 37 81 IPR001005 -
Acco13g0937 254 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Acco13g0937 254 CDD SANT 90 132 IPR001005 -
Acco13g0937 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Acco13g0937 254 MobiDBLite consensus disorder prediction 138 163 - -
Acco13g0937 254 SMART sant 86 134 IPR001005 -
Acco13g0937 254 SMART sant 33 83 IPR001005 -
Acco13g0937 254 MobiDBLite consensus disorder prediction 139 157 - -
Acco13g0937 254 FunFam Transcription factor TT2 90 161 - -
Acco13g0937 254 SUPERFAMILY Homeodomain-like 33 128 IPR009057 -
Acco13g0937 254 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Acco13g0937 254 Gene3D - 90 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0937 Acco-ChrAcco13 7393363 7395878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0937 21 143 MYB Transcription Factor Family AT5G52600 72.358 3.74e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g0937 Myb_DNA-binding 3.5e-11 CL0123