Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0920 ATGTCGAGCTGCAACATCGATGTTGCCCCTGAGCAACTTTGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTATTTGACATAGTGACGGTTCGATGTGGACACTGCAGCAATCTATGGTCAGTGAACATGGCTGCTGCGTTTCAGTCACTGTCGTGGCAAGATGTTCAGGCGGCTGGTGGATACAACAATCAGGAGTACAGAATTGAGACAGGTTCCTCTTCCAAATGCAACAATAATATGATTTCAATGAGTGCGCCCTCCAATCATCATGTTTCTAAGGACAGAATTGTGAACCGCCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCCAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGCTGGAAGCCAACAAAAATCAAGCTAAGATGGAGAATGGGAGTGAGAAGCATTTAATGACGAGGGCAGCACTTTTGAACAAATGA 573 0.4555 MSSCNIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVQAAGGYNNQEYRIETGSSSKCNNNMISMSAPSNHHVSKDRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANKNQAKMENGSEKHLMTRAALLNK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0920 190 CDD HMG-box_SF 116 152 - -
Acco13g0920 190 PANTHER PROTEIN YABBY 6-RELATED 1 173 IPR006780 GO:0007275
Acco13g0920 190 Gene3D High mobility group box domain 99 181 IPR036910 -
Acco13g0920 190 SUPERFAMILY HMG-box 103 156 IPR036910 -
Acco13g0920 190 FunFam axial regulator YABBY 5-like 100 158 - -
Acco13g0920 190 Pfam YABBY protein 9 162 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0920 Acco-ChrAcco13 7141829 7145784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0920 8 173 C2C2-YABBY Transcription Factor Family AT2G26580 75.301 2.38e-84 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco13g0920 YABBY 1.9e-70 CL0114