LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco13g0893	ATGGCCACGTCCAAGGCCATAGCCAGAGATGAATCTGATTATGATAGTAGCTCCTCCTCCCTCACCACTCTGCCGGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCAGCAGCCGCCGCCGCAGCAGCTCCGTCTCTGTCTGTTCCTCCACCACCACAGACACCACCACCTCCTCCTCTCTGTACCTCAGCTCCCACACCAAGCCTCACAAGGCCAACCAAACAGCATGGGAGGCCATGTCCCGCCTCCGCCGTGAAAGCAACGGCCACCTCGGCCTCCACCACTTCCACCTCCTCCGCCGTCTAGGCGGAGGTGACCTCGGCAACGTCTACCTCTGTCAGATTAGAAACCCCCTCGTTATTGGGTCAAAACAGAGTCTTTACGCCATGAAAGTTGTGGACAGAGAAGCACTTTCAGTGAGAAACAAGTTGCAGAGAGCTCAAATGGAGAGAGAGATTCTGCGCATGCTTGATCACCCATTTTTACCCACTTTATATGCAGATTTCGATGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGTCCTGGTGGTGATTTATATGCTTCTCGCCAGCGTCAGCCAGGAAAACGATTCAGTATTCAATCGACCAAGTTTTATGCTGCTGAGACACTGTTGGCTATGGAATATCTTCACATGATGGGTATAGTGTACAGAGATTTGAAGCCAGAGAATGTGTTAGTGAGAGAGGATGGGCATATTATGCTCTCTGATTTTGATCTCTCTCTCAAGTGTGATGTTGTTCCTAAGCTCTTGAGAAGTAAATCCAGTTTCAAAAATATCCCAAGAGGCTCTTCATCATCATCAACAACAACACATCCTGCCTGTGCTGCTCCCATGCAATCTTGTTTCTCATCAGCTTCATTTCGAAGCAAGAGCAAGAGAGAAAGTAGAGTCATTACAATCATAAGGGAAAATGCCGGAGTCCAAAAGCAACAGGAACAAAAAGAAGATGAAGGAGAAGAAGACATTGATGATGATGAAGATGATGAGCCAGAGCTAGTGGCAGAACCTATAAATGCAAAGTCTACGTCATTTGTAGGGACTCATGAGTACTTAGCACCAGAAGTGATCTCAGGGCAAGGCCATGGAAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGTTATATGGAAGAACACCATTCAAAGGAGAGAACAATGGCAAAACACTCTTAAACATCCTGAAGCAGCCATTGGCATTTCCCAGAATTGCAGCTAGCAGCAGCAAGGAATATGAAGAAATGGTGAGAGTTCAAGACCTGATAAGCAAACTATTAGTGAAGAATCCCAAGAAGAGAATTGGAAGTTTCATGGGTTCTGTTGAAATCAAGAGGCATGAGTTCTTCAGAGGTGTCAATTGGGCTTTGATTAGATCAATAAAACCACCTGAGGTTCCTGCTGATATGAACAAGATTAGAAGTGGCAGTAACAGAGTTTTATTACCAAAACTAAGCAAGAAAGATAGAGATCAGCCCTATCAGATTACTCATAATTTTGATTACTTCTAA	1545	0.457	MATSKAIARDESDYDSSSSSLTTLPESSRSWMTNLSFSSRRRSSSVSVCSSTTTDTTTSSSLYLSSHTKPHKANQTAWEAMSRLRRESNGHLGLHHFHLLRRLGGGDLGNVYLCQIRNPLVIGSKQSLYAMKVVDREALSVRNKLQRAQMEREILRMLDHPFLPTLYADFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSIQSTKFYAAETLLAMEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKNIPRGSSSSSTTTHPACAAPMQSCFSSASFRSKSKRESRVITIIRENAGVQKQQEQKEDEGEEDIDDDEDDEPELVAEPINAKSTSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLLNILKQPLAFPRIAASSSKEYEEMVRVQDLISKLLVKNPKKRIGSFMGSVEIKRHEFFRGVNWALIRSIKPPEVPADMNKIRSGSNRVLLPKLSKKDRDQPYQITHNFDYF	514

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco13g0893	514	FunFam	protein kinase PINOID 2	95	182	-	-
	Acco13g0893	514	CDD	STKc_phototropin_like	101	479	-	-
	Acco13g0893	514	Pfam	Protein kinase domain	97	253	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco13g0893	514	Pfam	Protein kinase domain	350	461	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco13g0893	514	SMART	serkin_6	97	461	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco13g0893	514	FunFam	serine/threonine-protein kinase D6PK-like	349	479	-	-
	Acco13g0893	514	MobiDBLite	consensus disorder prediction	46	68	-	-
	Acco13g0893	514	MobiDBLite	consensus disorder prediction	311	339	-	-
	Acco13g0893	514	ProSiteProfiles	Protein kinase domain profile.	97	461	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco13g0893	514	FunFam	protein kinase PINOID	183	251	-	-
	Acco13g0893	514	Gene3D	Phosphorylase Kinase; domain 1	95	182	-	-
	Acco13g0893	514	SUPERFAMILY	Protein kinase-like (PK-like)	78	479	IPR011009	-
	Acco13g0893	514	Gene3D	Transferase(Phosphotransferase) domain 1	349	479	-	-
	Acco13g0893	514	Gene3D	Transferase(Phosphotransferase) domain 1	183	252	-	-
	Acco13g0893	514	PANTHER	FLIPPASE KINASE 1-RELATED	28	482	-	-
	Acco13g0893	514	MobiDBLite	consensus disorder prediction	1	25	-	-
	Acco13g0893	514	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	224	236	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco13g0893	Acco-ChrAcco13	6864099	6865754	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco13g0893	1	514	AGC Kinase Gene Family	AT2G26700	56.410	0.0	583

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Acco13g0893		Pkinase	1.2e-31	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco13g0893	13	6864099	6865754	Acco13g0893	13	6864099	6865754	ECH