Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0879 ATGAGGGAGATACAAATGACAGGAGAGGCCAACCATTTCAGTCTGTCTACAGGAATATTGCCTTCTCTTGGAGCCAGCAATACCCCCAGAATCAGACTCAAGACCTGCGTTTTCTCTCCTTATGATCCTCGTTACAGGTTGTGGGTGAACTCTCTAGTGCTTCTGGTGCTGTACACTGCATGGGTATCGCCATTTGAGTTCGGTTTCCTGGATAAGCCAGTACAGTTCCTCTCGATCACAGACAATGTTGTGAATGGATTCTTCGCTGTGGATATTGTTCTCACCTTCTTTGTCGCCTACATTGACAAAATCACCTACCTCATGGTTGAAGATCACAAAGCCATCGCCAAAAGGTATCTCAAGACATGGTTCGTCTTAGATTTCATCTCCATTATCCCTTCGGAGGTCGCTCGTCAGGTTCCAATCCCAGTATTTCAATCCTATGGATCTTTCAACATGCTTCGGCTTTGGCGACTTCGTAGAGTCAGTGCCCTGTTTGCTAGACTGGAGAAGGACATACACTATAACTATTTCTGGGTTCGGTGTATTAAACTTATCTGTGCCACCCTCTTTTCCGTTCACTTAGCCGGATGCATCTTCTATTTTATTGCTGCATACTATCCTGATCCTAAACATACTTGGATGGGGTTATCAATGGAAAACTTCCATCAAGAGAACTTGTATACAAAATATGTGTACTCTCTGTATTGGTCTATCACTACTTTAACAACTGTGGGTTATGGTGATCTGCATCCAGTGAATGCGTTTGAGATGATCTTTAACATCTTTTACATGCTCTTCAATCTGGCGTTGACGTCGTATTTGATTGGTAATATGACCAACTTAATTGTCCATTGCACAAGTCGGACCAGGAGCTTCAGGGATGCCATAAAAGCTGCCTCAAATTTTGCGGAAAGGAACCATTTGCCTGTTCGTCTGAAAGATCAGATGCTTGAACACATGTGTTTGAGGTTCAGAACAGATTCAGAGGGATTGCAGCATCACGAGAGCCTTGAAACTCTACCTAAAGCCATCAGGTCAAGCATTTCACGTAATCTTTTTTACTCTGTGGTGGATGATGTCTACCTTTTTTCCGGAGTTTCAAAGAACTTGATCTTTCAACTGGTAACAGAGACGAAAGCAGAGTATTTCCCCCCAAAAGAAGATGTTATCTTGCAGAACGAAGAACCAACTGACCTTTATATAATAGTCACTGGTGTTGTGGTCGTAGGCGAGGCCAAAGCTGGTGATGCCATTGGTGAGATCGGAGTGCTTTGCCATAGACTACAACCCTTTACCGTTCGAACCAAGCGATTATGCCAGCTGCTGAGGCTGAACCGCACTACATTTTTAAATGCTATTCATTCCAACGTTGGAGATGGGAACATAATAATGAATAATCTCCTTCAGCATTTGAAGGAGTGTAAGGACCCATTTATGGACGGAATTCTAGTGACTACAGAGAACTTGCTAGCTAGTGGTAGGGTGCACCTGCCACTGAGTCTCTCCTTTGCCGCATTGAGAGGAGATGACTGGTTGCTGCATCAGTTGTTGAATCGGGGCTTGGATCCAAATGAATCCGACAACAAAGGAAGGACTGCTTTGCATATAGCGGCATGCAAAGGAAGCTTGGACAATGTCATGCTTCTTTTGGACCATGGGGCATATCCAAACATTAGAGATTATGATGGTAATGTGCCATTATGGGAGGCTATAGTGGGCGGACACGAGTCAGTGAGCAAGCTGTTAGTAGAAAATGGCGCTAACTTAGCATGTGGAGATGTGGGTCAATTTGCATGCATTGCTGCTGAACAGAATAATCTGAACTTGCTCAAGGATATAGTGAAACATGGAGGAGATGTGTCACTTCCTAGGAATTATGATGGGAGCACAGCATCACATATTGCAGTCTGTGAAGGCAATGTTGAGATTGTCAAGTTCCTTTTGGAACAAGGCGCCGACATTGATCAACCAGACAGGACTGGTTGGAAGCCAAGAGCTCTAGCGGATCAACAAGGACATGAGGAGATTAAGGCCATGTTTCAGTCTATCGTGGAACCGAAGGCTCCCACTCCGGCCCATTCGACTCCTGAGAGGTATGTTGGAAGAATTGCAAGAGCTGGGAGGAACCATGGACATCACCAAGCAAGAGTAACAATTAGTTGCCCTGAAAAGTCTGATATTGCAGGGAAAATTGTGCTTCTCCCAGGGAGCTTTAAGGATCTACTTGAGATTGGAGCTAATAGATTTGGTATCACTGTCTCTAGGATTCTGAGCAAAGATGGGGCTGAAATTGATGATCTTGAGGTGATTAGAGATGGTGATCTTCTTTTGTTTGTTAGTTCTGAAAAGATATTCAAATCTGTTTCCTCTACTCCTCCTGATGGTTTGTAA 2394 0.4403 MREIQMTGEANHFSLSTGILPSLGASNTPRIRLKTCVFSPYDPRYRLWVNSLVLLVLYTAWVSPFEFGFLDKPVQFLSITDNVVNGFFAVDIVLTFFVAYIDKITYLMVEDHKAIAKRYLKTWFVLDFISIIPSEVARQVPIPVFQSYGSFNMLRLWRLRRVSALFARLEKDIHYNYFWVRCIKLICATLFSVHLAGCIFYFIAAYYPDPKHTWMGLSMENFHQENLYTKYVYSLYWSITTLTTVGYGDLHPVNAFEMIFNIFYMLFNLALTSYLIGNMTNLIVHCTSRTRSFRDAIKAASNFAERNHLPVRLKDQMLEHMCLRFRTDSEGLQHHESLETLPKAIRSSISRNLFYSVVDDVYLFSGVSKNLIFQLVTETKAEYFPPKEDVILQNEEPTDLYIIVTGVVVVGEAKAGDAIGEIGVLCHRLQPFTVRTKRLCQLLRLNRTTFLNAIHSNVGDGNIIMNNLLQHLKECKDPFMDGILVTTENLLASGRVHLPLSLSFAALRGDDWLLHQLLNRGLDPNESDNKGRTALHIAACKGSLDNVMLLLDHGAYPNIRDYDGNVPLWEAIVGGHESVSKLLVENGANLACGDVGQFACIAAEQNNLNLLKDIVKHGGDVSLPRNYDGSTASHIAVCEGNVEIVKFLLEQGADIDQPDRTGWKPRALADQQGHEEIKAMFQSIVEPKAPTPAHSTPERYVGRIARAGRNHGHHQARVTISCPEKSDIAGKIVLLPGSFKDLLEIGANRFGITVSRILSKDGAEIDDLEVIRDGDLLLFVSSEKIFKSVSSTPPDGL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0879 797 SMART cnmp_10 363 469 IPR000595 -
Acco13g0879 797 PRINTS Ankyrin repeat signature 531 546 IPR002110 GO:0005515
Acco13g0879 797 PRINTS Ankyrin repeat signature 644 658 IPR002110 GO:0005515
Acco13g0879 797 FunFam Potassium channel KAT3 47 285 - -
Acco13g0879 797 SUPERFAMILY Voltage-gated potassium channels 40 284 - -
Acco13g0879 797 Pfam Ankyrin repeats (3 copies) 601 658 IPR002110 GO:0005515
Acco13g0879 797 Pfam Ankyrin repeats (3 copies) 502 591 IPR002110 GO:0005515
Acco13g0879 797 PANTHER POTASSIUM CHANNEL AKT1 11 781 IPR045319 GO:0005249|GO:0006813
Acco13g0879 797 FunFam Potassium channel KAT2 351 476 - -
Acco13g0879 797 PRINTS EAG/ELK/ERG potassium channel family signature 257 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g0879 797 PRINTS EAG/ELK/ERG potassium channel family signature 231 248 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g0879 797 PRINTS EAG/ELK/ERG potassium channel family signature 81 91 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g0879 797 PRINTS EAG/ELK/ERG potassium channel family signature 92 101 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g0879 797 PRINTS EAG/ELK/ERG potassium channel family signature 275 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g0879 797 PRINTS EAG/ELK/ERG potassium channel family signature 58 65 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco13g0879 797 Gene3D Jelly Rolls 328 476 IPR014710 -
Acco13g0879 797 ProSiteProfiles cAMP/cGMP binding motif profile. 363 471 IPR000595 -
Acco13g0879 797 ProSiteProfiles Ankyrin repeat region circular profile. 628 660 - -
Acco13g0879 797 ProSiteProfiles Ankyrin repeat profile. 530 562 IPR002110 GO:0005515
Acco13g0879 797 ProSiteProfiles Ankyrin repeat region circular profile. 563 590 - -
Acco13g0879 797 Pfam KHA, dimerisation domain of potassium ion channel 717 779 IPR021789 -
Acco13g0879 797 SMART ANK_2a 563 592 IPR002110 GO:0005515
Acco13g0879 797 SMART ANK_2a 628 657 IPR002110 GO:0005515
Acco13g0879 797 SMART ANK_2a 530 559 IPR002110 GO:0005515
Acco13g0879 797 SMART ANK_2a 497 526 IPR002110 GO:0005515
Acco13g0879 797 SMART ANK_2a 594 623 IPR002110 GO:0005515
Acco13g0879 797 CDD CAP_ED 363 457 IPR000595 -
Acco13g0879 797 Pfam Ion transport protein 47 290 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco13g0879 797 Gene3D - 499 683 IPR036770 -
Acco13g0879 797 ProSiteProfiles Ankyrin repeat profile. 563 595 IPR002110 GO:0005515
Acco13g0879 797 SUPERFAMILY Ankyrin repeat 465 682 IPR036770 -
Acco13g0879 797 Gene3D - 47 285 - -
Acco13g0879 797 ProSiteProfiles KHA domain profile. 717 797 IPR021789 -
Acco13g0879 797 SUPERFAMILY cAMP-binding domain-like 288 472 IPR018490 -
Acco13g0879 797 ProSiteProfiles Ankyrin repeat profile. 628 660 IPR002110 GO:0005515
Acco13g0879 797 ProSiteProfiles Ankyrin repeat region circular profile. 530 561 - -
Acco13g0879 797 Pfam Cyclic nucleotide-binding domain 383 456 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0879 Acco-ChrAcco13 6754951 6759951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0879 4 780 Ion Channels AT4G32500 56.014 0.0 922