Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0870 ATGATAGAGCTTTGTTGCTGCCAGAGAGAGAGGACAGGCCACCAGCTTTCAGCTGCAGACCACCACTTCTCTCTTTTAAACGAGGAGGAAGAGGGAGTTGAGTCGGCTCATAGAAATAACATTAAAAACAACACAACACATAGCGTAAAGCACAAGAACGACTCTCTGAAAATGAAGGACCCAGAAGAAGATCAAGTTATTAAATCCAGAAAGGCTATGCAGAAACACACTACGGATCGTAGAAGAAGAGGTAGGAGAAGAAGCCATTGCAATAAACCCGAGATATTAAAAGAAAAAGGGGTTGATTTAGAACTGATCAATCCTTTTGCTGCTGCTGCTGCTTGCAATAGTAATAGCCTTGAGTTCACCCATAGGCCTGGCTATGGCCAGCTTGGGACAAAGTGTGTGGTCAAAGCTAATCACTTTCTTGCAGATATATCTGCATCTGACTTGAGCCATTACAGTGTTAAGATAATACCTGAAGTTACTTCCCGTAAAATAAGCAAAGCTATTATTGCTGAGTTGGTGAGACTTCATAGAAACACAAACTTGGGTACGAGGCTCCCTGTTTATGATGGAGGAAGGAATCTTTATACTGCTGGTTTGCTTCCTTTTACACACAAAGAATTCACCATTACATTGACTGAAGAAGATGAGGGTACAGGCAATACCTGGGAAAGAGAGTTTAGAGTGAAAATCAAGTTTGCGACTCGTGTTAGCATGCATCAACTACGGGAACTTCTCAGTGGGAAACAAGTGAACACTCCACAAGAAGCACTTAACATCATTGATATTGTATTAAAGGAACTTGCAGCTCATAGTTACGTGTCAGTTGGAAGGTTTCTCTATTCTGCTGATATAAAAAAACCACAGCAGCTAGGTGGTGGTCTGGAATCATGGCGTGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCTCTTAACATTGACATGTCATCAAAGGCGTTTATTGAACCACTCCCTGTCATTGATTTTGTTGCTCAAATTCTGGGAAAAGATGTGCATTCAAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAAAAAGCCTTAAGAGGCGTGAAAGTTGAAGTTACACATAGAGTAAATGTTAGAAGGAAGTACAGGATTTCAGGACTGACATCACAGCCTACAAGAGAGCTTATATTCCCTCTTGATGAGCAAATGAACATGAAATCAGTGGTTGATTACTTCCGGGAGATGTATGGTTATACAATTAAGTATTCTCATCTACCATGCCTGCAAGTAGGGAATGAAAAGAAGGTCAATTATTTGCCAATGGAGGCATGCAAGATAGTTGGGGGCCAGAGATATACAAAAGGGCTAAATGAGAAACAGATAACTTCTCTGCTTAAAGTTTCATGCCAAAGACCCCGTGAACAAGAGCTGGACATTCTACAGACAGTTGAACAAAATGATTATGAGAATAATCCCTATGCAAAAGAATTTGGTATCAGCATAGATGACAAGCTCGCATTGGTTGAGGGTCGGGTTCTGCCTGCTCCATGGTTGAAATATCATGATACAGGAAGGGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTTATAAACGGAAGCATAGTAAGATACTGGGCATGTATCAATTTCTCACGCAGTGTTCAAGAAAGCACAGCTCGCGGTTTTTGCCAGCAGTTGGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGCCAGGAGCCAGTAATTCCTATATACACAGCAAGACCAGATCAGGTTAAAAAGGCCTTGAAATATGTACACTCTGCCGCTTTAGACAAACTCGAAGGCAAAGAACTAGAATTGCTCATTGCTATTCTTCCAGACAATAATGGCTCTCTGTACGGTGATCTCAAAAGGATATGTGAAACAGATCTGGGGTTGATTTCTCAGTGCTGCCTCACAAAACACGTCTTCAAGGTTAATAGACAATACCTGGCAAATGTGGCACTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTGCTTTTGGATGCATTGAGTTGGAGAATTCCATTGGTTAGTGACATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCTGGAGAGGATTCTTCTCCATCCATTGCTGCTGTTGTAGCGTCACAGGACTGGCCTGAAGTAACAAAGTATGCAGGACTTGTGTGTGCTCAGCCTCATCGTGAAGAACTCATTCAAGATCTTTTCAAGTGTTGGAAAGATCCTCAGCGTGGAGTAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCTACTGGACAAAAGCCGTTGAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAATTCTACCAGGTTTTGTTGTATGAACTTGACGCGATCCGCAAGGCTTGTGCATCACTGGAACCTAGTTATCAACCTCCAGTAACATTTGTTGTGGTTCAAAAGCGGCACCACACTCGACTCTTCTCAAGCAATCACGACGACAGAAATAGCACTGACAGGAGTGGCAACATCTTACCAGGAACCGTGGTGGATTCTAAGATCTGTCATCCCACAGAATTTGACTTTTATTTATGCAGCCATGCAGGAATACAGGGCACGAGTAGACCGGCTCACTATCATGTCCTCTGGGATGAGAACAAATTCACTGCAGACGAGATTCAATCCTTAACCAACAACTTATGCTACACGTATGCAAGATGCACAAGATCTGTTTCCGTAGTGCCTCCAGCATATTATGCTCATCTAGCAGCTTACAGGGCTCGATTCTACATGGAACCTGATGTGCATGAGAATGCTAAAGCACGCGGTGGTGGGGCAAGATCAAAGGATGGTTCGGTTCGGCCATTGCCGGCATTGAACGAGAAGGTGAAGAATGTAATGTTCTACTGTTGA 2931 0.4255 MIELCCCQRERTGHQLSAADHHFSLLNEEEEGVESAHRNNIKNNTTHSVKHKNDSLKMKDPEEDQVIKSRKAMQKHTTDRRRRGRRRSHCNKPEILKEKGVDLELINPFAAAAACNSNSLEFTHRPGYGQLGTKCVVKANHFLADISASDLSHYSVKIIPEVTSRKISKAIIAELVRLHRNTNLGTRLPVYDGGRNLYTAGLLPFTHKEFTITLTEEDEGTGNTWEREFRVKIKFATRVSMHQLRELLSGKQVNTPQEALNIIDIVLKELAAHSYVSVGRFLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSKAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRVNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFREMYGYTIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTVEQNDYENNPYAKEFGISIDDKLALVEGRVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSIVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQEPVIPIYTARPDQVKKALKYVHSAALDKLEGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKVNRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHENAKARGGGARSKDGSVRPLPALNEKVKNVMFYC 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0870 976 Gene3D - 686 976 IPR036397 GO:0003676
Acco13g0870 976 Gene3D - 507 680 - -
Acco13g0870 976 SMART DUF1785_2 276 328 IPR014811 -
Acco13g0870 976 Pfam Piwi domain 618 937 IPR003165 GO:0003676
Acco13g0870 976 Pfam Mid domain of argonaute 526 603 IPR032473 -
Acco13g0870 976 MobiDBLite consensus disorder prediction 74 90 - -
Acco13g0870 976 FunFam Argonaute 10 507 680 - -
Acco13g0870 976 SMART PAZ_2_a_3 333 465 IPR003100 GO:0005515
Acco13g0870 976 MobiDBLite consensus disorder prediction 47 73 - -
Acco13g0870 976 ProSiteProfiles PAZ domain profile. 329 443 IPR003100 GO:0005515
Acco13g0870 976 MobiDBLite consensus disorder prediction 29 93 - -
Acco13g0870 976 Pfam PAZ domain 333 459 IPR003100 GO:0005515
Acco13g0870 976 FunFam Protein argonaute-2 322 448 - -
Acco13g0870 976 SMART Piwi_a_2 617 938 IPR003165 GO:0003676
Acco13g0870 976 Pfam Argonaute linker 1 domain 277 326 IPR014811 -
Acco13g0870 976 SUPERFAMILY PAZ domain 324 483 IPR036085 GO:0005515
Acco13g0870 976 SUPERFAMILY Ribonuclease H-like 606 939 IPR012337 -
Acco13g0870 976 Pfam N-terminal domain of argonaute 133 267 IPR032474 -
Acco13g0870 976 CDD Piwi_ago-like 487 937 IPR045246 -
Acco13g0870 976 ProSiteProfiles Piwi domain profile. 617 938 IPR003165 GO:0003676
Acco13g0870 976 Gene3D paz domain 323 447 - -
Acco13g0870 976 CDD PAZ_argonaute_like 328 442 - -
Acco13g0870 976 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 116 939 - -
Acco13g0870 976 Pfam Argonaute linker 2 domain 473 515 IPR032472 -
Acco13g0870 976 FunFam protein argonaute 10-like 686 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0870 Acco-ChrAcco13 6683428 6694940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0870 116 976 Eukaryotic Initiation Factors Gene Family AT5G43810 74.625 0.0 1394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0870 13 6683428 6694940 Acco13g0870 13 6683428 6694940 ECH