Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0868 ATGGCTTCTCCCTCTGAACTAAGCCTGATGGATTGCAAACCCCATAGCTATTCTTTGCTTCTGAAATCATTTGGAGATCAGGCAGATCATACCTACAAGCTTGAGGACTTCCTTTCTCGCCTCGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTCCTCACCAACGCTATGGAGGCATCAAGGCAGCAACTTCAGGCGTACAGAGCAAATCAAGGCACCACGAGGCCAGTGCTAGAAGAATTCATACCCATAAAGCAATCAACCTCTGAAAGCTCTGAGAAGGCGCCCAACATAGCAGACAATAAGGCAAATTGGATGACATCTGCTCAATTATGGAGTAGCCAAGCAAATGAAGGAACCAAGTCCCAATCCACAATCATCACATCCCCTACTAAAGAAGCTGAAATTGGTTTCAGTGTGAGCCCTAAGCTCGCTCTACTTGACAACAAACAGAGGAATGGTGGAGGAGCCTTCCTACCATTTTCAAAAGAAAGAAACTCGTCGTCATTATGCCAAAGTAATAACTCCACATTACGGGTCATCCCAGAGTTGGCCTTGGCCTCTGTTGAGAAAGAAATTATGGAGGATAAGAAATGCACAGAACCAGAAAAAAATGCAGTGTCATGTCCCAAGATGGAAAATTCCGGTAAAGCCTCAGGATTAGGCAACTGTACTGTGGTCACTGATCAAGGAAAAGGAGCTCCATCAGTTGGATCTGATCCACAAACAACCACCACCACCATTAACCAAACTCATCGGAAGGCAAGAAGATGCTGGTCACCCGACCTGCACCGCCGATTTGTAAATGCTCTTCAGATGCTAGGTGGATCTCAAGTGGCTACCCCAAAGCAGATAAGGGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCATACCCGACGTCCCAGTCCAAGCCCACAAATAACCGGTTCACCGGCACCGCAGCTCGTAGTTTTAGGAGGAATCTGGGTCCCACCGGAATACGCTGCCGCCGCCGCTCAGACTGGCGCACCCGCCATCTATAGCCCGCACCCTACCTCCCACGCGCCGCCGCCGCACTACTGTTCCGCAACGCCGGTGCACCAAGAGTTCTACGCAGCCGCGACGGCGCAGCAGCCAGCTCCGCCGCACTACCAAACGCTGCTCCATCACCATCTGCAGATGTACAAAACGAATTCGCCGCACCAAGGCTCGCCGGCTTCGGAGACGCGAGGAGGGGGGGAGAGGTCGGAGAGTATAGAGGACGGGAAATCGGAGAGCAGCAGCTGGAAGGGAGAGAGTGGGGAGAACGAAGGGAAGAGGAAAGGGCTGGCAGCACTGAGAGAAGAAGAAGAGAGTAGTCGGAGCGAGACGACTCTGAAATTTTAG 1428 0.5119 MASPSELSLMDCKPHSYSLLLKSFGDQADHTYKLEDFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAYRANQGTTRPVLEEFIPIKQSTSESSEKAPNIADNKANWMTSAQLWSSQANEGTKSQSTIITSPTKEAEIGFSVSPKLALLDNKQRNGGGAFLPFSKERNSSSLCQSNNSTLRVIPELALASVEKEIMEDKKCTEPEKNAVSCPKMENSGKASGLGNCTVVTDQGKGAPSVGSDPQTTTTTINQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQITGSPAPQLVVLGGIWVPPEYAAAAAQTGAPAIYSPHPTSHAPPPHYCSATPVHQEFYAAATAQQPAPPHYQTLLHHHLQMYKTNSPHQGSPASETRGGGERSESIEDGKSESSSWKGESGENEGKRKGLAALREEEESSRSETTLKF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0868 475 MobiDBLite consensus disorder prediction 427 475 - -
Acco13g0868 475 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 260 320 IPR017930 -
Acco13g0868 475 MobiDBLite consensus disorder prediction 410 475 - -
Acco13g0868 475 MobiDBLite consensus disorder prediction 410 425 - -
Acco13g0868 475 MobiDBLite consensus disorder prediction 240 263 - -
Acco13g0868 475 FunFam Myb family transcription factor 262 320 - -
Acco13g0868 475 NCBIfam myb-like DNA-binding domain, SHAQKYF class 263 318 IPR006447 GO:0003677
Acco13g0868 475 SUPERFAMILY Homeodomain-like 260 321 IPR009057 -
Acco13g0868 475 Pfam Myb-like DNA-binding domain 265 316 IPR001005 -
Acco13g0868 475 Coils Coil 59 79 - -
Acco13g0868 475 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 444 IPR044787 GO:0003700|GO:0006355
Acco13g0868 475 MobiDBLite consensus disorder prediction 240 264 - -
Acco13g0868 475 Gene3D - 262 320 - -
Acco13g0868 475 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0868 Acco-ChrAcco13 6663668 6665943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0868 1 475 G2-like Transcription Factor Family AT2G03500 49.798 1.61e-132 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco13g0868 Myb_DNA-binding 1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1694 04 22839648 22842188 Acco13g0868 13 6663668 6665943 CCT
Acco13g0868 13 6663668 6665943 Acco13g0868 13 6663668 6665943 ECH