Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0866 ATGGCCGACTATTTTTACGCTTGGCGTTTGATCATTGTCTTCTTCGTCGTCTCTCTTCTTCTCCTGCAAGTCAGTACGGAGCCGACTCAGGACAAGCAAGCCCTCCTTGCCTTCATCTCTCAGACCCCACACGCGAATCGCGTCCAATGGAACGCTTCCGATTCAGCCTGCAACTGGTTTGGTGTTGAATGCGACGCTTCTCGTTCTTTCATCTTCTCTCTTCGTCTTCCCGGCGTTGGGCTTGTAGGAGTAATTCCTGCCAATACAATTGGTCGTCTCACTCAGCTTCGAGTTCTGAGTCTCCACTCTAATGGTCTCTCCGGCGAGATCCCTGCCGATTTCTCTAATTTGACGTTGCTTCGGAGTTTGTACCTCCAGGACAACCAGCTCTCCGGTGGGTTTCCCCATTCTCTGACTCAGTTGGGCCGGTTGATTCGCTTGGATCTCTCGTCCAACAATTTTACGGGTCCAATCCCTTTCTCCATCAACAATTTGACCCACTTGACTGGTTTATTCTTGCAAAGCAATAAGTTCTCAGGCAATCTACCAAGCGTGAGCGCCAAATTGGTGGGATTCAACGTTTCTAACAATCAGCTCAATGGTTCGATCCCCAAGTCTCTCTCGAATTTCCCCGCATCCTCATTCGCCGGAAACTTAAATCTCTGCGGCGGACCATTGCCGCCATGTACCCCATTCTTCCCGTCTCCGGCTCCGTCGCCTTCCGCCCCCGTTGTACCCTCTTCCCCAGTTCAGAAAAAGTCCAAGAAGCTTTCAAAAGGCGCTATTATCGGAATTGCGGTCGGGTGTTCTCTTGCGGCCTTGTTACTCCTCCTGCTCCTGCTCCTGCTATGCCTAGGCAAACGCCGCCGAAGCCAGCCAGCGAAGCCGCCGAAGCCCGTGGTGGCGGCGCGTGCTGCGCCGGCGGAGGCCGGAACATCGTCCTCGAAAGACGATATCACCGGTGGGTCGGTGGAGGCAGAGAGGAACAAGCTGGTGTTCTTCGAAGGCGGGTTATACAGCTTCGATTTGGAAGATCTGTTGAGAGCTTCCGCCGAAGTTCTGGGCAAAGGAAGCGTCGGAACTTCCTACAAGGCGGTGTTGGAAGAAGGAACTACTGTGGTGGTAAAGAGATTAAAAGACGTGGCCGTAACAAAGAAAGACTTCGACGCTCAAATGGATGCTCTGGGCAAGATTAAACACGAGAATGTGGTTTCTCTCAGAGCTTACTATTTCTCTAAGGATGAGAAATTGCTCGTCTACGATTACCTCCCATCTGGTAGCTTGTCGGCTCTGCTTCACGGGAGCAGGGGGTCAGGGAGGACGCCACTTGACTGGGATAACCGAATGAGAATAGCGCTAGGCGCCGCCAGGGGGTTGCTTCACCTACACGTGTCGGGAAAAGTGGTCCACGGCAACATCAAAGCGTCCAACGTACTCCTCAGAGGAATCGACAACGAGGCCTGCGTTTCGGACTTCGGGCTTAACCTGTTGTTCGCTAACACCACTCCCTCCAACCGGGTTGCGGGTTACAGGGCACCCGAAGTACTCGAAACCCGGAAAGTCACTTTCAAATCCGACGTATACAGCCTCGGCGTTTTGCTGCTGGAGCTCCTCACCGGGAAGGCGCCGAACCAGGCGTCGCTGGGCGAGGAGGGGATTGACCTTCCGAGATGGGTTCAGTCGGTGGTCCGGGAAGAATGGACAGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGTTGTTGCAGATAGCCATGGCGTGCGTGTCGGTGGTTTCCGATCAGAGACCGACCATGCAGGAGGTGGTTCGGATGATGGAGGAGATCAATAGGAGCGAGACGGACGAGGGGTTGCGGCAGTCATCGGACGATCCATCGAAGGGATCGGACGGTCAAACGCCGCCGGCCGAGTCAAGGACTCCACCCAGATCAATCACACCTTAA 1968 0.5422 MADYFYAWRLIIVFFVVSLLLLQVSTEPTQDKQALLAFISQTPHANRVQWNASDSACNWFGVECDASRSFIFSLRLPGVGLVGVIPANTIGRLTQLRVLSLHSNGLSGEIPADFSNLTLLRSLYLQDNQLSGGFPHSLTQLGRLIRLDLSSNNFTGPIPFSINNLTHLTGLFLQSNKFSGNLPSVSAKLVGFNVSNNQLNGSIPKSLSNFPASSFAGNLNLCGGPLPPCTPFFPSPAPSPSAPVVPSSPVQKKSKKLSKGAIIGIAVGCSLAALLLLLLLLLLCLGKRRRSQPAKPPKPVVAARAAPAEAGTSSSKDDITGGSVEAERNKLVFFEGGLYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVTKKDFDAQMDALGKIKHENVVSLRAYYFSKDEKLLVYDYLPSGSLSALLHGSRGSGRTPLDWDNRMRIALGAARGLLHLHVSGKVVHGNIKASNVLLRGIDNEACVSDFGLNLLFANTTPSNRVAGYRAPEVLETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVSDQRPTMQEVVRMMEEINRSETDEGLRQSSDDPSKGSDGQTPPAESRTPPRSITP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0866 655 Pfam Protein kinase domain 351 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0866 655 MobiDBLite consensus disorder prediction 290 321 - -
Acco13g0866 655 FunFam Probable inactive receptor kinase RLK902 28 186 - -
Acco13g0866 655 Pfam Leucine rich repeat 83 130 IPR001611 GO:0005515
Acco13g0866 655 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Acco13g0866 655 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
Acco13g0866 655 MobiDBLite consensus disorder prediction 616 655 - -
Acco13g0866 655 MobiDBLite consensus disorder prediction 616 631 - -
Acco13g0866 655 Gene3D Ribonuclease Inhibitor 189 232 IPR032675 -
Acco13g0866 655 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Acco13g0866 655 SUPERFAMILY Protein kinase-like (PK-like) 352 615 IPR011009 -
Acco13g0866 655 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 628 - -
Acco13g0866 655 FunFam pollen receptor-like kinase 1 318 422 - -
Acco13g0866 655 ProSiteProfiles Protein kinase domain profile. 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0866 655 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Acco13g0866 655 PANTHER OS05G0588300 PROTEIN 12 627 - -
Acco13g0866 655 SUPERFAMILY L domain-like 32 210 - -
Acco13g0866 655 MobiDBLite consensus disorder prediction 632 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0866 Acco-ChrAcco13 6634266 6637013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0866 5 638 Receptor kinase-like Gene Family AT5G58300 52.492 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco13g0866 Pkinase 1.4e-35 CL0016