Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0853 ATGTTTCCTACAAACCCTTTTCCCTTTGACAGCAACCTAAACTCCACGCAACATCAAAGCCTTCCTCCTCCTCCTCCTTCTTTCTCCTTTCTTCACTTTCCTCCACCTTCCTTTGAAGACAATGAAATCTTTCTTCCTCAACAACCAAACCACCACCATGACCATCTAGTCTTACTTCCTCATCATCAATCACAACCTCTAGCAGAAGCAGCAGGCGTGGAGGTTCCGAGCAAGAATGAGCAGATCCTGGCGACGATGAGGAACAAGAGGATTTGCAAGAGAGATAGGCACAGCAAGATCAAGACGGCTAAAGGGCTAAGAGATCGGAGAATGAGACTTTCTTTGGAAGTAGCTAAGAGATTCTTTGGTCTTCAAGACATTCTAGGCTTTGACAAGGCCAGCAAAACCGTTGAGTGGTTGCTGAATCAGTCAGAGGATGAGATCAAACAGCTTGCAAGAGATAAGAATTACAATAATAATTGCAGTGGGATCAGTGGTGGGACAGTGAAGAGTGCATCTTCAACTTCAGAGTGTGAAGGGGTTTCAGGTTTAGATGATGTAGCATTAAGTGGAATGAATCAAGAACAACGAGAGGGAGATCAGCAACGACCCGTACTGGTAACGAAGAGAAGGGCAAGAAATACAAGAAAGAGTGCACTTTTATTGGATCCTCTAATTGCAAGAGAGTCAAGGGAAAAAGCTAGAGAGAGGGCAAGAGAGAGGACCAAGCAGAAGCAGAAGATGAAGATGAAAGGTCGAAAATTATTTCCAGAAGCAGCTGATGACAACACAACCAACCATAGCTGTAATCTCACACAATTTGGTTCATGGAATCCGTTTGAAACAGGAGAAAAGGTGAATGATCCTACCTTAGAGGTCAATATGGCTGAGGCTGCTGAAGACGAACCAAGTTCTCAGCCAAACGTAGATGATGATTCCTTGGCGGTTAATATGATATTCAACTCATTGAATACTTCATTTACACTCGTACAAGATTATCATCAATTTGTGGAATTTCAGTCCTTGGCAAAACTTTGGGAGGCCTGCAACAATCACATGATCTAA 1065 0.4319 MFPTNPFPFDSNLNSTQHQSLPPPPPSFSFLHFPPPSFEDNEIFLPQQPNHHHDHLVLLPHHQSQPLAEAAGVEVPSKNEQILATMRNKRICKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDILGFDKASKTVEWLLNQSEDEIKQLARDKNYNNNCSGISGGTVKSASSTSECEGVSGLDDVALSGMNQEQREGDQQRPVLVTKRRARNTRKSALLLDPLIARESREKARERARERTKQKQKMKMKGRKLFPEAADDNTTNHSCNLTQFGSWNPFETGEKVNDPTLEVNMAEAAEDEPSSQPNVDDDSLAVNMIFNSLNTSFTLVQDYHQFVEFQSLAKLWEACNNHMI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0853 354 Pfam TCP family transcription factor 93 249 IPR017887 -
Acco13g0853 354 ProSiteProfiles TCP domain profile. 93 151 IPR017887 -
Acco13g0853 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 67 282 IPR005333 GO:0003700
Acco13g0853 354 MobiDBLite consensus disorder prediction 1 29 - -
Acco13g0853 354 MobiDBLite consensus disorder prediction 1 18 - -
Acco13g0853 354 MobiDBLite consensus disorder prediction 230 252 - -
Acco13g0853 354 Coils Coil 231 251 - -
Acco13g0853 354 ProSiteProfiles R domain profile. 228 245 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0853 Acco-ChrAcco13 6486736 6488041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0853 89 267 TCP Transcription Factor Family AT3G18550 42.932 1.07e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco13g0853 TCP 1.6e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0853 13 6486736 6488041 Acco13g0853 13 6486736 6488041 ECH