Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0837 ATGGATTCAATGGACATCGTTGGGAAATCGAAGGAAGACGCTTCCCTTCCCAAAGCAACTATGACAAAAATTATCAAAGAGATGTTACCTCCTGATGTACGTGTTGCAAGAGATGCACAAGATCTATTGATTGAATGCTGTGTAGAGTTTATAAACCTGGTTTCATCAGAGTCCAATGAAGTCTGTAATAGAGAGGATAGACGGACAATTGCACCAGAGCATGTATTGAAGGCTTTACAGGTTCTTGGGTTTAGTGAGTACATTGAGGAAGTTTATGCAGCATATGAGCAGCATAGGATTGAGACCACGGACTCTTTAAGAGCTGGCAAGTTGAGCAATGGAGCTGAGATGACCGAGGAGGAAGCATTACTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGAATGAATGGTGGGACCATTGCTTCCAAGCAGCCAGATGCTGACCAAACTTTAGATGGCTAA 468 0.4402 MDSMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDRRTIAPEHVLKALQVLGFSEYIEEVYAAYEQHRIETTDSLRAGKLSNGAEMTEEEALLEQQRMFAEARARMNGGTIASKQPDADQTLDG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0837 155 FunFam Negative cofactor 2 beta 6 141 - -
Acco13g0837 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Acco13g0837 155 Gene3D Histone, subunit A 4 141 IPR009072 GO:0046982
Acco13g0837 155 PANTHER PROTEIN DR1 HOMOLOG 1 153 IPR044255 -
Acco13g0837 155 SUPERFAMILY Histone-fold 12 141 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0837 Acco-ChrAcco13 6359388 6363040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0837 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 81.699 1.18e-88 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco13g0837 CBFD_NFYB_HMF 1.8e-22 CL0012