Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0834 ATGGCTGGCGGTAGAAGAAAGAAGCATAACTTCAGCGGAATTCATGCTTTTGCATGTGGGAAAGCGTCGTTCAATGGGGAACATTCACTGATTGGAGGACCTGGGTTTTCAAGAATAGTATATTGCAATGACCCAGAACGAGCTGAGGCGAGTCTTATCAATTATGGTGATAACTACGTCAGAACAACAAAGTACACTTTGGTTTCGTTTCTTCCCAAGTCATTGTTTGAGCAATTTAGAAGAGTTGCCAATTTCTTTTTCCTCTTATGTGCGATCTTGGCTTTCTTCCCTGTCTCTCCTTGGGAATCTCCTTTCAGCTCTGTTTTCCCTCTTGTTTTTGTGGTTGCTCTTACAATGGCCAAAGAGATTATTGAAGATTGGAGAAGGAAGAAACAGGATATTGAGATTAATAACAGAAAGGTTAAAGTACATCGTGGAGGAGCTTTTGATTCTACTAAATGGAAGGATCTGAAAGTTGGAGATGTAGTCAAAGTTGAGAAAGATGAATTCTTTCCTGCTGATCTCATCTTACTCTCATCAAGCTATGATGATGCGATTTGCTACGTGGAGACCACAAATCTTGATGGAGAAACAAACCTTAAACTGAAACAAGCATTGGAAGAAACCTCAAAGTTACAAGAAGACTCTAGCTTTCAAAATTTCAAGGCCATTATTGCATGTGAAGATCCAAATGCAAATTTGTACTCATTTATTGGAACAATGGAGCTAGAGGGTCAACAGTATCCTCTCACACCTCAGCAATTACTACTTAGAGACTCTAAGCTGAGGAACACAGATTTTATTTATGGTGTGGTGATATTTACAGGTCATGATACAAAGGTTATCCAGAACTCAACAGAGCCTCCTTCAAAGAGAAGTAACATAGAAAGAAGGATGGATAAAATTGTCTACTTTTTATTCTGTTTATTGTTTGTGATTTCTTTTATCGGGTCTGTTTTCTTTGGGATTTATACAAGTGAAGACCTTAAAAATGGTAAAATGACAAGATGGTACCTTAGACCAGACGAGACTACAATTTTTTATGATCCAAAGAGAGCAGCAATTGCAGCAATGTTGCATTTCTTGACCGTACTTATGTTGTATGGTTACTTCATTCCCATTTCCCTCTATGTGTCAATAGAAATTGTGAAAGTTCTTCAGAGCTTCTTCATCAACCGTGACGTGCACATGTATTATGAGGAAACTGACAAGCCAGCTCATGCTCGTACCTCGAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTCTCAGATAAAACAGGAACTTTGACTTGTAACTCCATGGAATTTATCAAATGTTCCATTGCTGGGGTTGCTTATGGACAAGGAGTCACAGAAGTTGAGAGAGCTCTAGCAAGGAGGAAAGGGTCCCCTATAGAACAATTATCGATCAAAGAAGAAGATGACAATGTTGCAGATATTTCTGAAGCAAAGCCAACTGTTAAAGGGTTTAATTTCGTAGAAGAAAGGATCACAAATGGGAATTGGGTTAATGAGCCTCATGCAAAAGTAATCCAAAGCTTCTTAAGATTGCTGGCGGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTCAAGTTTCATATGAAGCTGAATCACCGGATGAAGCAGCATTTGTGATTGCTGCTAGAGAACTTGGGTTTGAGTTCTTTGAAAGGACACAGACGACCATTTTACTTCATGAGTTTGATCCTCTATCTGGCAGGAAGGTTGAAAGATCCTACAAACTTTTAAACGTATTAGAGTTTAGCAGTGCAAGAAAGCGGATGGCTGTAATTGTAAGAGACGAGGACGGGAATCTACTGCTATTATGCAAAGGAGCCGACAGTGTAATGTTTGAAAGACTATCAAAGAATGGAAGAGAGTTTGAAGAGAAAACCAGGGAGCACGTGAATGAGTACGCTGATGCTGGTCTGAGGACATTGATACTCGCGTATCGTGAGCTTGATGAGGAATTGTACGACCAATTTAACAAAGAATTCACAGAGGCCAAGAACATAGTGAGTGCAGATCGAGAGCAGATTGTGGAAGAAATAGCAGAACGGATTGAGAAGGATCTAATCCTTCTTGGTGCTACTGCTGTTGAAGATAAACTCCAAAATGGGGTTCCAGAATGCATCGACAAGCTTGCACAGGCTGGAATTAAGCTCTGGGTTCTGACTGGTGATAAAATGGAGACAGCAATCAATATAGGATTTGCTTGTAGCTTACTAAGACAAGGAATGAAACAAATTATAATTAGCTCTGAAACTCCGGAAATCAAATCACTGGAGAAATTGGAGGACAAGTCTGCTGCTGCTGAGGCAATTAAGGCAAGTGTTCTTCATCAGATACAGGAGGGGAAGGCGTCATTATCTTCATCAGATGAAAATCCTGAGGCATTTGCTCTGATCATTGATGGCAAGTCTCTCACTTATGCGTTGGAAGATGATGCGAAGGACTTGTTTCTTGAACTTGCCGTTGGCTGCGCATCTGTCATATGTTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACAAGGTTAGTTAAGACTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGGATGCTCCAAGAAGCCGACATTGGAATTGGTATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCGAGTGACATTGCCATTGCCCAATTTCGGTTCTTAGAACGCTTACTTCTTGTACATGGACATTGGTGTTATAGAAGGATCTCATCCATGGTCTGTTATTTTTTCTACAAGAACGTTACTTTTGGCTTCACCCTCTTCTTCTATGAGATGTATGCATCATTCTCAGGACAACCAGCCTACAATGATTGGTTCCTATCACTTTATAATGTATTATTTACATCACTTCCGGTGATTGCCTTAGGAGTGTTTGATCAAGATGTCCCAGCAGAACTATGTCTCAAGTTTCCATTGTTATACCAAGAAGGTGTACAAAATGTCTTGTTCAGCTGGACCAGGATACTCAGTTGGCAATTCAACGGCATCTTAAGTGCCACTTTGATATTCTTCTTCTGCATCAATGCACTGGAGAATCAGGCCTTCAGAAAAGGTGGCGAAGTTGTCGGAATAGAAATCCTCGGAGCTGCAATGTACACTTGTGTAGTTTGGGTGGTAAATTGCCAAATGGCATTATCTATCAACTACTTCACTTTCATACAACATATTTTCATCTGGGGTAGCATTATATTCTGGTATATATTCCTTCTGGCTTATGGAGCCATGGATCCTACCATATCTACAACTGCATATCAAGTCTTCATTGAAGCTTGTGCCCCTGCACCTTCTTACTGGCTTGTCACTTTGCTTGTTCTTGTTGCATGCCTCATTCCATATTTTGCTTGTGCTTCGATAAAGATGAGGTTTTTCCCCTCGTACGATCAAAAAATACATTTGATCAGTAACGATGGCCGAGTACATGATCCTGAATATTGTAGTGAGGTTCGGTCCAGATCGATCCGCCAAACCACCGTCGGGTTCACGGCTCGGTTTGAAGCTTCCAAACGGTTTGATGAAGAGAAGTCTGAGAGTATGAGCATGAGCATCCCTTGA 3606 0.4068 MAGGRRKKHNFSGIHAFACGKASFNGEHSLIGGPGFSRIVYCNDPERAEASLINYGDNYVRTTKYTLVSFLPKSLFEQFRRVANFFFLLCAILAFFPVSPWESPFSSVFPLVFVVALTMAKEIIEDWRRKKQDIEINNRKVKVHRGGAFDSTKWKDLKVGDVVKVEKDEFFPADLILLSSSYDDAICYVETTNLDGETNLKLKQALEETSKLQEDSSFQNFKAIIACEDPNANLYSFIGTMELEGQQYPLTPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVIQNSTEPPSKRSNIERRMDKIVYFLFCLLFVISFIGSVFFGIYTSEDLKNGKMTRWYLRPDETTIFYDPKRAAIAAMLHFLTVLMLYGYFIPISLYVSIEIVKVLQSFFINRDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGQGVTEVERALARRKGSPIEQLSIKEEDDNVADISEAKPTVKGFNFVEERITNGNWVNEPHAKVIQSFLRLLAVCHTAIPEVDEETGQVSYEAESPDEAAFVIAARELGFEFFERTQTTILLHEFDPLSGRKVERSYKLLNVLEFSSARKRMAVIVRDEDGNLLLLCKGADSVMFERLSKNGREFEEKTREHVNEYADAGLRTLILAYRELDEELYDQFNKEFTEAKNIVSADREQIVEEIAERIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEIKSLEKLEDKSAAAEAIKASVLHQIQEGKASLSSSDENPEAFALIIDGKSLTYALEDDAKDLFLELAVGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCYFFYKNVTFGFTLFFYEMYASFSGQPAYNDWFLSLYNVLFTSLPVIALGVFDQDVPAELCLKFPLLYQEGVQNVLFSWTRILSWQFNGILSATLIFFFCINALENQAFRKGGEVVGIEILGAAMYTCVVWVVNCQMALSINYFTFIQHIFIWGSIIFWYIFLLAYGAMDPTISTTAYQVFIEACAPAPSYWLVTLLVLVACLIPYFACASIKMRFFPSYDQKIHLISNDGRVHDPEYCSEVRSRSIRQTTVGFTARFEASKRFDEEKSESMSMSIP 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0834 1201 Gene3D - 118 286 - -
Acco13g0834 1201 Gene3D - 699 904 IPR023214 -
Acco13g0834 1201 Coils Coil 117 137 - -
Acco13g0834 1201 Pfam Phospholipid-translocating ATPase N-terminal 40 101 IPR032631 -
Acco13g0834 1201 FunFam Phospholipid-transporting ATPase 117 286 - -
Acco13g0834 1201 FunFam Phospholipid-transporting ATPase 542 700 - -
Acco13g0834 1201 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Acco13g0834 1201 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Acco13g0834 1201 SFLD C1.7: P-type atpase like 406 915 - -
Acco13g0834 1201 Pfam Cation transport ATPase (P-type) 523 627 - -
Acco13g0834 1201 NCBIfam phospholipid-translocating P-type ATPase 55 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco13g0834 1201 SFLD p-type atpase 406 915 IPR044492 -
Acco13g0834 1201 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1142 IPR023298 -
Acco13g0834 1201 FunFam Phospholipid-transporting ATPase 700 904 - -
Acco13g0834 1201 NCBIfam HAD-IC family P-type ATPase 107 210 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0834 1201 NCBIfam HAD-IC family P-type ATPase 831 946 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0834 1201 SUPERFAMILY HAD-like 419 919 IPR036412 -
Acco13g0834 1201 CDD P-type_ATPase_APLT_Dnf-like 57 1024 - -
Acco13g0834 1201 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 488 702 IPR023299 GO:0000166
Acco13g0834 1201 SUPERFAMILY Calcium ATPase, transduction domain A 138 283 IPR008250 -
Acco13g0834 1201 Pfam E1-E2 ATPase 136 329 - -
Acco13g0834 1201 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1150 - -
Acco13g0834 1201 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Acco13g0834 1201 Gene3D - 538 698 IPR023299 GO:0000166
Acco13g0834 1201 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1143 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0834 Acco-ChrAcco13 6327855 6333778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0834 1 1187 Primary Pumps ATPases AT1G68710 69.853 0.0 1784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0834 13 6327855 6333778 Acco13g0834 13 6327855 6333778 ECH