Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0826 ATGGCACCACAAGATACTGCCTCTGGTGTTGAAATGCCCCAGAAAACTTCTGGTCTGCTGCGGGATCAGGTTCAGCTGGTGAAAAGAAAGGACTCTGATCGCTATGAAATTGTCTCAATCCCAGATTCTCTCTCATTTGAGAAAGGTTTCTTCATAGTTATTCGTGCATGCCAATTGCTGGCTCAAAAGAATGCTGGGTTAATATTAGTAGGAGTTGCTGGACCCTCTGGAGCTGGGAAGACAGTTTTCACTGAGAAGGTCCTCAACTTCATGCCAAGCATTGCTGTCATAACAATGGACAACTATAATGATTCTAGCCGAGTCATAGATGGCAATTTTGATGACCCTCGGCTGACAGATTATGATACATTGCTCGAAAATATACAGGGTCTCAAAGCTGGCAAGCCAGTTCAGGTTCCAATATATGATTTCAAGTCTAGCTCTCGCATAGGCTACAGGACTGTTGAAGTCCCTAGCTCCCGTATTGTCATCATAGAAGGCATCTATGCCTTGAGTGAAAAATTACGCCCTTTGCTAGATCTTCGGGTGTCTGTCACTGGAGGAGTACACTTTGACCTTGTCAAGCGTGTCTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATTTCTGAAACGGTATACCCAATGTATAAAGCCTTTATTGAGCCAGATCTCCAAACAGCTCATATAAAAATCATAAACAAGTTTAATCCATTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCAACAAAGGCTGTGACGGAGGATGAAATCAAGGCCGTTATTGCTGCAGAGCATACTGAAACCACGGAGGAAACATATGACATATATCTTCTACCACCTGGGGAAGATCCTGAAGCATGTCAATCATACTTGAGGATGAGAAACCGGGATGGGAAGTACAATCTTATGTTTGAGGAATGGGTTACAGACAGTCCGTTCATAATATCTCCTAGAATTACTTTCGAGGTTAGTGTACGCCTTCTGGGGGGACTGATGGCCTTGGGGTACACAATTGCTGCTATCCTGAAAAGAAACAGCCATATCTTTCATGATGATAAAGTATCAGTAAAAACTGATTGGTTGGAACAACTTAATCGCCTATATGTTCAGGTACAAGGCAGAGATAGAAACTATGTTAAATATGTGGCAGAGAAACTGGGATTGGATGGTTCATATGTTCCTCGCACCTATATTGAACAAATTCAGCTGGAGAAGCTTATAAACGATGTCATGGCATTGCCAGAGGATCTGAAATCCAAACTCAGTATAGACGATGATGTGATTTTGAGCCCCAAAGAAGCCCTTTCCAAAGCTTCTGCAGATAGGAGAACGAAGTACTTAAATCGCAGTTTGTCACACTCCTATTCAAGTCAAAGAGAAAAGAGTCTATCTAAGTTGGCTAGATTAACTATAAACAACCGGCGATTTGATGGACGTGCTCTAGAATCACCTGCAGCAATTGCAAACCAAGGAGTCATTACACAACTTTCTGATCAAATTTCTACACTAAATGAGAGAATGGATGAGTTCACATCCCGCATTGAAGAGCTGAATTCGAAGTTTGCAAACAGAAAAGTTTCCGCCAGTCAGCAGAACTTGGCTTTACAAGCTGAATCTTGCAATGGCTCGGGACCCACTTCCCTCTTCCTTAATGGGTTGGGCAATGGTTCGTTGACCGGATCGCTGTTGCCTAATTCTTCATCATCTTCCCAACTGGCGAGGGAGTCCCAACAGTTGGAAGAGTTGAGACGGGGACAAAATCAAATCATGCATCGACTAGATAGTCTGAGCAATCTTTTGCATGATTACATTGGAGAGAGTGCACGTATAAGAAGAGTAAACCAGCCAAGCAGGATGCCTGACGTTGACTTCGCCACCCCGCTTGTTCTGACTTTGGCAATTGGTGCTGTTGGCGTATTTTTGTTCAAGGGTTTGACATCTCATAAATGA 1977 0.431 MAPQDTASGVEMPQKTSGLLRDQVQLVKRKDSDRYEIVSIPDSLSFEKGFFIVIRACQLLAQKNAGLILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSTKAVTEDEIKAVIAAEHTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHIFHDDKVSVKTDWLEQLNRLYVQVQGRDRNYVKYVAEKLGLDGSYVPRTYIEQIQLEKLINDVMALPEDLKSKLSIDDDVILSPKEALSKASADRRTKYLNRSLSHSYSSQREKSLSKLARLTINNRRFDGRALESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFANRKVSASQQNLALQAESCNGSGPTSLFLNGLGNGSLTGSLLPNSSSSSQLARESQQLEELRRGQNQIMHRLDSLSNLLHDYIGESARIRRVNQPSRMPDVDFATPLVLTLAIGAVGVFLFKGLTSHK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0826 658 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Acco13g0826 658 Gene3D - 256 415 - -
Acco13g0826 658 Coils Coil 502 529 - -
Acco13g0826 658 PANTHER URIDINE KINASE 16 425 - -
Acco13g0826 658 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
Acco13g0826 658 CDD UMPK_like 69 241 - -
Acco13g0826 658 Gene3D - 68 248 IPR027417 -
Acco13g0826 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 238 IPR027417 -
Acco13g0826 658 PRINTS Uridine kinase signature 134 149 - -
Acco13g0826 658 PRINTS Uridine kinase signature 226 239 - -
Acco13g0826 658 PRINTS Uridine kinase signature 67 84 - -
Acco13g0826 658 PRINTS Uridine kinase signature 190 200 - -
Acco13g0826 658 Pfam CYTH domain 272 406 IPR023577 -
Acco13g0826 658 SUPERFAMILY CYTH-like phosphatases 264 409 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0826 Acco-ChrAcco13 6270112 6274857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0826 68 238 PRT Gene Family AT5G40870 27.778 3.22e-18 86.3