Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0825 ATGGGGTGCTCGTTTTCTGGGTTGAATGCTCTCTACGACGCCGTTAATGGAGGAGGAGATGTCTGGATCAATGAGAACCGATTCCGAATCGTCAGGCAGCTCGGGGAAGGTGGATTTGCCTTCGTCTATTTGGTTAAGGAGGTAGTCGCTGACTCATCTCCCGCCTCTGCTGACAGTGGTCTCTCTAAGAAGCTCAAAGACTCCTCTCATGTCTCTGAAGATGGAACTTATGCCTTGAAAAAGATCCTCATTCAGAATAGCGAACAGTTGGACTTGGTGAGGGAGGAGATCCGTGTCTCATCCCTGTTCAGTCATCGAAATCTGCTCCCACTTCTTGATCATGCAATCATCTCTGTCAAGCCTACCCAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACGTTGCTGGACAATGCCAAAACAATGAAAGCCAAGAAGGAGTTCTATTCTACCTCTGATGTTCTTCAAATATTTCGGCAGCTTTGCGCAGGACTTGAGCATATGCACAGTTTAGATCCTCCATATGCACATAATGATGTCAAACCTGGAAATGTTCTGATAACACATAGGAAAGGGCAATCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAAGAGGCAAATTCGCTCCCGACAAGAGGCATTACAGCTACAGGAATGGGCAGCTGAACACTGCTCTGCTCCTTTTCGTGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATTGATGAAAGGACTGATATTTGGTCATTGGGATGCACAATGTATGCGATTATGTATGGTGTATCTCCATTTGAATATGCACTTGGAGAATCTGGAGGAAGTCTGCAATTGGCGGTTGTGAATGCTCAGGTCAAATGGCCAGCTGGACCTAAGCCCCCATATCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAGCCTCAGGCTGCTGTGAGGCCCCGGATAAACGATATCATTATCCACGTTGATAAGCTGATTGCAAAGTTCTCTACTTGA 1041 0.4659 MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVYLVKEVVADSSPASADSGLSKKLKDSSHVSEDGTYALKKILIQNSEQLDLVREEIRVSSLFSHRNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLEHMHSLDPPYAHNDVKPGNVLITHRKGQSPLAILMDFGSARPAKRQIRSRQEALQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTMYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPPYPEALHQFVTWMLQPQAAVRPRINDIIIHVDKLIAKFST 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0825 346 SMART serkin_6 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0825 346 Gene3D Transferase(Phosphotransferase) domain 1 16 345 - -
Acco13g0825 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
Acco13g0825 346 CDD STKc_16 27 342 - -
Acco13g0825 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Acco13g0825 346 ProSiteProfiles Protein kinase domain profile. 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0825 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Acco13g0825 346 Pfam Protein kinase domain 70 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0825 Acco-ChrAcco13 6261727 6266222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0825 33 336 EF-hand Containing Proteins AT4G04710 23.948 2.54e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Acco13g0825 Pkinase 4.1e-28 CL0016