Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0820 ATGGAGGGCCATGAAGCTGAGAAACTCTATGGAGTAGCTAGTTCAAGCTCAACCCAGCATCCCCAATTTGCTTCTGCAACTGAGAAGCCAATCCTGAACATGGAAACAGTGGAAGACTACCATGTGTTGGCTCATTTGGATCAATTTCAAAGCTCACATTACATTCCACTTTACTACTCACAAGTAAATACTCTGATTCAAATCCCACGGCAGAAATTCTCTCCAAATACATCTCTTCACCGTAACATCAATGAAGCAAAAGCTATTGTTGATGACCAGCAGAGAAGAAGAATGCTTTCTAACAGAGAATCTGCGCGCAAATCACAAATACGAAAGAAGCAACAAATGGAAGCACTTCAGTGTCGTGTAAATGATTTGCAAGCTATGAATGATCAACTCTCTAGAAAGATCATCAGCTCACTGGAATGTAACCAGCAACTGCTCCAACAGAATCTTCAGCTTAAAGAGAAGGTTTCCTCTCTGCAAGAAGCCCTCTCAAACTTGTTAATCCCCAGTGGCTCCATAGGAGAGCCTTCACTGGCATAA 546 0.4231 MEGHEAEKLYGVASSSSTQHPQFASATEKPILNMETVEDYHVLAHLDQFQSSHYIPLYYSQVNTLIQIPRQKFSPNTSLHRNINEAKAIVDDQQRRRMLSNRESARKSQIRKKQQMEALQCRVNDLQAMNDQLSRKIISSLECNQQLLQQNLQLKEKVSSLQEALSNLLIPSGSIGEPSLA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0820 181 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 28 172 IPR044521 -
Acco13g0820 181 SMART brlzneu 89 153 IPR004827 GO:0003700|GO:0006355
Acco13g0820 181 SUPERFAMILY Leucine zipper domain 94 150 IPR046347 GO:0003700|GO:0006355
Acco13g0820 181 Gene3D - 92 144 - -
Acco13g0820 181 CDD bZIP_plant_GBF1 94 142 IPR045314 GO:0003700|GO:0006355
Acco13g0820 181 Coils Coil 116 136 - -
Acco13g0820 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 91 137 IPR004827 GO:0003700|GO:0006355
Acco13g0820 181 Coils Coil 144 164 - -
Acco13g0820 181 MobiDBLite consensus disorder prediction 1 24 - -
Acco13g0820 181 Pfam Basic region leucine zipper 91 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0820 Acco-ChrAcco13 6196181 6196726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0820 42 171 bZIP Transcription Factor Family AT5G60830 41.912 6.05e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco13g0820 bZIP_2 6.3e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0820 13 6196181 6196726 Acco04g2863 04 45202510 45203130 CCT