Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0816 ATGGAGCTCCCTCAAGCGCGTTCCTTCCGAAACGAAGCCAGAAAACCGACGCATGACTTTCTGTCACTGTACAGTCATTCAACTGCCCAGCAAGATCCAAGGCCACCATCTCAAGGAAGTTACCTGAAAACGCATGATTTCTTGCAGCCGCTAGAACGTGTTGAGAAGAGAGCAAGCGCCAAAGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGCCACCACCACCCGCACCACCGCCACAACCATGTGTTGAGCATATCCTACCTGGAGGCATTGGGACTTACAGTATCAGCCACATTTCGTATTTTAGTAATCACAGGATTCCAAAGCCGGAGGCTTCCCTTTTCACTGTGTCTCAAGCCTGTGAAGCAAGTTCAGATAGAAATGAGGAGAATTCTAACAGCAGTTCATATACTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTGCCGTTAAGAAGGGAAAGACAGGGAAGGAGAATGATGTGGGAGAGAAACCCGTTACAGCAGAGTGTGGGATCAAAGCAGGACAGTGGTCGATGACTGAGAGAGCATCTCAGTCATTTGTTAAGAATAATCAGAATAGCTTCAATTCTATCACATCCACTCAGAAAACTGGGCAGAAGAACCAGAGTTTCATTGATATGATAAAATCCGCCAAGGATTGTTCTCAGGATGAGGAGCTAGACAATGAAGAAGCATTCATTTTTAAGGAAGGATCCTCAAATACCCAAAGAGGCGAATTGAGAGTGAAAGTGGATGGGAAAAGTTCTGATCAAAGGCCAAACACACCACGGTCGAAACATTCCGCAACAGAGCAGCGTAGGAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGGGAGCTTATTCCACAAAGTGACCAGAAAAGAGACAAGGCATCTTTTCTGTTGGAGGTCATTGAGTACATTCAATTTTTACAAGAAAAGGTTCATAAGCACGAAGGTTCATACCAAGTGTGGAATCAAGAGAAAGAAAAATTGACTCCATGGAGGAATAATCAAAAGCATTCAGAAAGCTATGAAGATCAATCTCGGGTAATAAATACCGGGTCAGGTCCTTCTTCAATGTTACTGTTCCCTTCAAAGATGGAGGAGGAAAATTTTAACATCTCCCCAACAGTAACTGGCGGCACGAAAAATGTAGCTGGTACTAGTACTGCAACTACATTGAAGGCAGTGAATCAACATCCTGGAATAACCAATAAGGCCGTGACAATTCCTAACTCTTCACAGCCAAATTTCTTCAATCCTGGCCAAAGTGGCGGTCCAGGTAGATTGGCGTCTCAGCTCACACACAGGCTAACCTCAGATGCTGAAAACACCATATATAATCCCTCAGGACTGTCTCAGACTCACTCTTCTGCTACAGGGGTGATTGCTGCTAGTGATAAGCTTAAAGAGAAAGATCTCACTATTGAAAGCGGCGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCACTAACACAAGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAGCATTTCAGTACAAATTGAGCTTGGTAAGCAAGCAAACATCAGACCAATTGGACCAACTTCTGGGGTTAAGGATGAAGTTACTTCTAGCAACCAAGGGATGAAGCGCTCTATAGTTTGTAGCGTGGAGGAGACTGACCTAGCAGTAAAGAAGCTAAAGACAACCCGAAGTTGA 1716 0.4417 MELPQARSFRNEARKPTHDFLSLYSHSTAQQDPRPPSQGSYLKTHDFLQPLERVEKRASAKEEASDEISSVVQKPPPPAPPPQPCVEHILPGGIGTYSISHISYFSNHRIPKPEASLFTVSQACEASSDRNEENSNSSSYTGSGFTLWEESAVKKGKTGKENDVGEKPVTAECGIKAGQWSMTERASQSFVKNNQNSFNSITSTQKTGQKNQSFIDMIKSAKDCSQDEELDNEEAFIFKEGSSNTQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPQSDQKRDKASFLLEVIEYIQFLQEKVHKHEGSYQVWNQEKEKLTPWRNNQKHSESYEDQSRVINTGSGPSSMLLFPSKMEEENFNISPTVTGGTKNVAGTSTATTLKAVNQHPGITNKAVTIPNSSQPNFFNPGQSGGPGRLASQLTHRLTSDAENTIYNPSGLSQTHSSATGVIAASDKLKEKDLTIESGAISISSVYSKGLLDSLTQALKNSGVDLSQASISVQIELGKQANIRPIGPTSGVKDEVTSSNQGMKRSIVCSVEETDLAVKKLKTTRS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0816 571 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 568 IPR044295 GO:0003700|GO:0006351|GO:0046983
Acco13g0816 571 MobiDBLite consensus disorder prediction 247 281 - -
Acco13g0816 571 MobiDBLite consensus disorder prediction 250 281 - -
Acco13g0816 571 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 336 IPR036638 GO:0046983
Acco13g0816 571 CDD bHLH_AtBIM_like 264 340 - -
Acco13g0816 571 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Acco13g0816 571 MobiDBLite consensus disorder prediction 21 44 - -
Acco13g0816 571 SMART finulus 271 321 IPR011598 GO:0046983
Acco13g0816 571 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Acco13g0816 571 MobiDBLite consensus disorder prediction 1 83 - -
Acco13g0816 571 MobiDBLite consensus disorder prediction 48 68 - -
Acco13g0816 571 Gene3D - 263 338 IPR036638 GO:0046983
Acco13g0816 571 FunFam BHLH domain class transcription factor 263 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0816 Acco-ChrAcco13 6156792 6161605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0816 1 526 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 49.267 2.78e-123 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco13g0816 HLH 1.7e-15 No_clan