Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0803 ATGCGAGAGTCCAGAAGTGAAAGAGCTCCTCTCTTGTTAAACGGAGAAGGAAGAAAGAGAGGTGATGCCTCAGCTGATCAGCCGACGGACCTTGAACATGGTGATGCTGTACCGGCTGCAAATGTGGGAGTATGTCGAGTGCTTTCACTTGCGAAGCCTGATGCTTGGAAGTTGGTAATTGCAACAGTGGCTCTGTTGATTGGATCTACCTCAAGTCTCTTAATTCCAAAATTTGGTGGGAAGATAATTGACATTGTTTCAGGAGATATTTCAACCCCTGAGGATAAAGCTAAAGCTCTGAATGCTGTAAACAGCACCATACTATATATCTTTCTGATTGTTGTCGTGGGTTCAGTTTCCACTGCACTGCGAGCATGGCTTTTCTCTTCTGCCAGTGAAAGGGTTGTTGCCCGTTTGAGAAAAAGATTGTTTAGTCACCTCATAAACCAGGAGATAGCCTTCTATGATGTTACTAGAACTGGAGAACTTCTAAGCAGGCTATCTGAAGATACACAGATAATAAAGAATGCCGCAACTACCAATCTATCTGAGGCCTTGAGAAATTTATCAACCGCCTTTATTGGTCTCTCTTTCATGTTTGCAACATCATGGAAGTTAACTTTATTGGCTTTGGTTGTTGTACCTGCTATTTCTGTTGCTGTTCGTAAATTTGGCCGGTTCTTGCGTGAACTTTCACACAAAACTCAAGCAGCAGCTGCAGTAGCTTCGTCGATCGCTGAGGAATCCTTTGGTGCTGTAAGAACTGTGAGATCTTTTGCCCAAGAAGAACATGAAATAGCACGGTATTCTGAGAAAGTTGAAGAAACACTTAAGCTTGGACTTAAACAGGCTAAAGTGGTTGGACTCTTTTCTGGAGGCCTCAATGCAGCATCTACACTGTCAGTTATTATAGTTGTTATATATGGAGCTAACTTAACAATCAAGGGTGCCATGTCTGCGGGTGATCTTACATCTTTCATTCTTTATAGTCTCACAGTGGGATCTGCCGTATCTGGTCTGTCGTCATTGTATACTGTAGTAATGAAAGCTGCTGGTGCTAGCAGACGCGTATTTCAACTTCTGGATCGAGTCTCTTCCATGCCTAAGTCAGGAAACAAGTGTCCTTTGGGTGATGAAGATGGTGAAGTGGAACTAGATGATGTTTGGTTTGCCTATCCATCACGTCCAAGTCATACAATACTCAAGGGAATAACATTGAAACTGGAGCCTGGCTCAAAGGTTGCTCTCGTTGGCCCTAGTGGTGGTGGAAAGACTACTATAGCTAACTTGATTGAAAGATTTTATGACCCAACCAAGGGAAAGATTCTGCTGAATGGGGTTCCTCTGGTAGAAATTTCACATGAGCATCTACACAAAAAGATCAGCATAGTGAGTCAGGAACCTACACTTTTCAACTGTTCAATAGAGGAGAACATAGCTTTTGGACTTAATGGCAAAGTTAATCCTGTTGATATAGAAAATGCTGCTAAAATGGCCAATGCACATGAATTTATATCTAAGTTCCCAGAGAAATACCAGACACATGTTGGAGAACGTGGGATACGGCTTTCAGGAGGACAAAAGCAAAGAATAGCTATTGCTAGGGCCCTGCTTATGGACCCAAAAATTCTTCTCCTGGATGAAGCCACTAGTGCCTTGGATGCTGAAAGCGAATACCTAGTACAAGATGCCTTGGATTCTCTAATGAAGGGGAGGACAGTTCTAGTTATTGCTCATAGGCTATCTACAGTTAAAAGTGCAAATACTGTAGCAGTTATTTCTGATGGTCAAATAGTTGAAAGTGGCACCCATGATGAACTTCTCAGCAAGAATGGTGTTTATACTTCATTAGTCAGAAGACAACTACAAACAGCAAAAACGGAAATCTAA 1890 0.4212 MRESRSERAPLLLNGEGRKRGDASADQPTDLEHGDAVPAANVGVCRVLSLAKPDAWKLVIATVALLIGSTSSLLIPKFGGKIIDIVSGDISTPEDKAKALNAVNSTILYIFLIVVVGSVSTALRAWLFSSASERVVARLRKRLFSHLINQEIAFYDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLSFMFATSWKLTLLALVVVPAISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAVRTVRSFAQEEHEIARYSEKVEETLKLGLKQAKVVGLFSGGLNAASTLSVIIVVIYGANLTIKGAMSAGDLTSFILYSLTVGSAVSGLSSLYTVVMKAAGASRRVFQLLDRVSSMPKSGNKCPLGDEDGEVELDDVWFAYPSRPSHTILKGITLKLEPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVPLVEISHEHLHKKISIVSQEPTLFNCSIEENIAFGLNGKVNPVDIENAAKMANAHEFISKFPEKYQTHVGERGIRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDALDSLMKGRTVLVIAHRLSTVKSANTVAVISDGQIVESGTHDELLSKNGVYTSLVRRQLQTAKTEI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0803 629 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 42 626 IPR039421 -
Acco13g0803 629 Gene3D ABC transporter type 1, transmembrane domain 109 380 IPR036640 GO:0005524|GO:0016020
Acco13g0803 629 Pfam ABC transporter transmembrane region 58 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco13g0803 629 MobiDBLite consensus disorder prediction 1 29 - -
Acco13g0803 629 MobiDBLite consensus disorder prediction 1 34 - -
Acco13g0803 629 SUPERFAMILY ABC transporter transmembrane region 46 362 IPR036640 GO:0005524|GO:0016020
Acco13g0803 629 Pfam ABC transporter 401 551 IPR003439 GO:0005524
Acco13g0803 629 Gene3D - 381 625 IPR027417 -
Acco13g0803 629 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 59 349 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco13g0803 629 CDD ABC_6TM_AtABCB27_like 61 357 - -
Acco13g0803 629 CDD ABC_MTABC3_MDL1_MDL2 383 621 - -
Acco13g0803 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 383 620 IPR003439 GO:0005524
Acco13g0803 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 621 IPR027417 -
Acco13g0803 629 FunFam ABC transporter B family member 25 110 380 - -
Acco13g0803 629 FunFam ABC transporter B family member 25 381 623 - -
Acco13g0803 629 PIRSF ABC_prm/ATPase_B 13 629 - -
Acco13g0803 629 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524|GO:0016887
Acco13g0803 629 SMART AAA_5 410 604 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0803 Acco-ChrAcco13 6022656 6028353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0803 63 621 Calmodulin-binding Proteins AT2G36910 38.354 7.10e-106 346