LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco13g0792	ATGGAGGAACATCAATCTTCCATCTTTACAACTGAAGGAGAGCAACATGTAGTAGCCGCGGCTCAACACCTTTTAAAGGCATTAGCAGCAAGCAAGAGCGTCAATGATGGTCTAAGAAAAAGTCTCTTGGATCTCGAGACCCATTTGTCTTCAATGTCCACAAGGCTAGCTGACAGAAATGGAAAGGGTATCAGGGAATTAGAGAGGCGTCTTAAATGTGCTGAAGACAAGGTTATGAGTTGGGAGGCGAATAATCAGATGATATGGGATTCTGGTCCTAGGGAAGCTTCTGAGTATTTGGGTGCTGTTGGTGAAATCCAATCTCTGACTCAAAGTTTGCTGAGCCTGCCTGTGAATGAAAATGGGAAGCAAAATGAACTTGTACGGCGAGCGGATGGAGTGCTGCAAGTCGCTATGTCAAGGCTTGAGGAAGAGCTAGTCCACATTCTTGTTCAGCACAAGCAATTTTTTGAGCCCGAATACATGTCTTTCCATTCTAATAGAGTTGATATGGTGTTTGGTGAATCTTTTGGTTCAGCTGAGGATGAACCAGTTGAGGAACTATCCCGGAATGATGGTGGGTTTGGCCAACTGGAGGCCTGTACTATAGATTTGGTGCACCCCGATGTAATCATGGATCTCAAAGCCATTGCCGATGTCATGTTTGCTTCAAAATACCATCAGGAATTCTGCCAGGCTTTCATTACTTCCAGGAGGCATGCCTTGGATGAGTACTTTGTTATTCTTGGAATTGAAAAACTGAGCATTGAGAATGTGCTGAGAATGGATTGGAGTTGCTTGAACTCTGAGATGAAGAAATGGATTCGGGTTACGAAGATCATCATCAAGGTATACCTTGCTGGCGAAAAACGTTTGTGTAAGCAGATTCTGGGACAATTTGGATCTGGTTATGAGTCTTGCTTTTGTGAAATATCAAGGAATTTTATGCTGCCCCTTTTGAATTTTGGTGAGGCTATTGCAATGGGAAGCCATGCCCCAGAGACATTGTTCCGCTTGCTCGATATGTATGAGGTTCTGGAGGATCTTGCTTTGGTTGTAGACATCTTGTTCTTTGAAGAAGCTGGTTGTTTCCTTAGGAATGAGTTTCAGAAGCTGGTAAGGAGCTTTGGTCACACTGTAAGGTCAACATTTCTGGCAATTGAAAGTACCATTGCAACTTATCCATCAACAAAAATGTTCCCTGGTGGGGCAATTCACCATCTCACCAGGTACGTCATGAATTACATTAAGACGATCACTGGGTATCAGGATACTCTTGGAAAGCTTCTTGCAGATGTAAGTTCAGAAGCTCCACCAGATACTGAACATGATGGATCTTCATCCCTGACAATTTGTCCAATGGCTTGCCACTTAAGGTCAATAACAACTGCATTAGAATCCAACCTGAGGAACAAGTCCAAATTATACAAAGACGTGTCCTTACGGCATATTTTCATGATGAATAACATTCATTACATGGTCCAAAAGGTTACGAGCTCTGAACTAAGCCAATTCTTCGGAGATGAATGGCTTCGCCAAAACACAGGGAAGTTCCGGCGTGAAGCTGTTAACTATGAGAGGGCCAGTTGGAGTTCAGTCCTTTCTATGCTTAAGGAGGACGGTAATCATCATTGTGCTTTAGGTTTAAAGGCAATCTCAAAGAAAAGATGGACTGATTTCAATACTGCCTTTGAGGAGGTGTATAGAACCCAGACAGGGTGGTGTGTCCCAGATCCTCAACTTCGGGAAGATTTACAGATTTCAATTTCTCAGAATCTGGTTCATGCTTACTGGACTATTATTGGGAAGATCTCATCTAGCATCAGTGAGAAGTGGATCAAGTACACAGTGGATGATCTGGAAGGGTTGATTTTGGATCTTTTTCAAGGTTCTTCGAAATCTTTGTCCAACCATCAACGCCAAAAGTGA	1929	0.4292	MEEHQSSIFTTEGEQHVVAAAQHLLKALAASKSVNDGLRKSLLDLETHLSSMSTRLADRNGKGIRELERRLKCAEDKVMSWEANNQMIWDSGPREASEYLGAVGEIQSLTQSLLSLPVNENGKQNELVRRADGVLQVAMSRLEEELVHILVQHKQFFEPEYMSFHSNRVDMVFGESFGSAEDEPVEELSRNDGGFGQLEACTIDLVHPDVIMDLKAIADVMFASKYHQEFCQAFITSRRHALDEYFVILGIEKLSIENVLRMDWSCLNSEMKKWIRVTKIIIKVYLAGEKRLCKQILGQFGSGYESCFCEISRNFMLPLLNFGEAIAMGSHAPETLFRLLDMYEVLEDLALVVDILFFEEAGCFLRNEFQKLVRSFGHTVRSTFLAIESTIATYPSTKMFPGGAIHHLTRYVMNYIKTITGYQDTLGKLLADVSSEAPPDTEHDGSSSLTICPMACHLRSITTALESNLRNKSKLYKDVSLRHIFMMNNIHYMVQKVTSSELSQFFGDEWLRQNTGKFRREAVNYERASWSSVLSMLKEDGNHHCALGLKAISKKRWTDFNTAFEEVYRTQTGWCVPDPQLREDLQISISQNLVHAYWTIIGKISSSISEKWIKYTVDDLEGLILDLFQGSSKSLSNHQRQK	642

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco13g0792	642	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	63	630	IPR004140	GO:0000145\|GO:0006887
	Acco13g0792	642	Coils	Coil	635	642	-	-
	Acco13g0792	642	Pfam	Exo70 exocyst complex subunit	272	625	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Acco13g0792	642	Gene3D	Exocyst complex component Exo70	79	638	-	-
	Acco13g0792	642	SUPERFAMILY	Cullin repeat-like	87	628	IPR016159	-
	Acco13g0792	642	Coils	Coil	64	84	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco13g0792	Acco-ChrAcco13	5897166	5899094	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco13g0792	1	629	EXO70 exocyst subunit family	AT5G61010	42.880	3.28e-174	508