Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0790 ATGCGTAGCGTCCACACTCCCATAGAGACATTGCGAAGCTCGGGAAGTTCGCAGATTAAAGGGATGGCTTTCTTTAGTAGAGTTGGGAATATACTAAGACAGGCTGCAAATAAGCAGCTCAGTTGGGAATTACGTTCAACTCCATCTATTTTCCAGGCTATACGATGCATGTCATCTGCTGCAAATTCAAGGGTGTTTGTAGGAGGACTGTCATATTCTACTGATGAGCAAAGTTTGAGGGAAGCTTTTGAGAAATATGGTCAAGTAGTTGATGCAAGGGTAATTATGGATCGTGACTCTGGAAGATCTAGAGGATTTGCCTTTGTCACATTCACATCAGTTGAGGAGGCATCAAGCGCTATACAGGCCTTAGATGGACAGGATCTGCATGGTCGCCAAGTTCGGGTAAATTATGCTAATGAAAGGCCTCGATATGGCGGCGGCGGTTTTGGTGGTTCTTATGGCAATGCTCCATATGGTGCTGGTGCTGGTGCTGGCTATGGAGGTGGTTATGGTAGCCCTCCCTATGGTGGTTCTGGTGCATATGGTGGCAATACTGGTGGAGGTTATGGTGGTGGTGGATATGGTGGAGGAAGCTATGGACCAAGTGGCGATTTTGGTGGCAGCACTAGCAATAACTATGCTTCTAACAATTTTGGAGCTGGGGCTGCAGGTGGCAGTTTTGGAAATGATGGTAACTTTGCAAGTGGAAGCCCTTATGGTGGAGGATATGGTGGTAACAGTGGGAGTGGAGCTGCTGCTGACAGCTTTGGAACTGGAAGTTCTGGTGGTGGCTTTGGAACTAGAAGTGCTGGTGGTGGCTTTGGCAGTACCAATTATGCAAATGATGGGAACATTGCAAGCGGAAGCACTTACACTGGTGGCAGCAGTGGGGGCTTTGTTGGTGATAGTGGGAGCTTTGCGAGTGGAAGCACTTATGCTGGTGGCAACAGTGGAAATTCAAGTGTCTCTGGTGGTGTTGGTGGTGATGACTATGGAAGTGCTTCTAGTTTTGGCGGTGCTGCTGCAAGTGGTGGCAGTGATAGCTTTGGTAGTGCTTCTGGATTTGGCAGCAGTGGTAACTTTGGCAGTTCGGTTGGGTTTGGCAGCAGTGGCAACTTTGGCAGTTCGGCTGATTTTGGTAGCAGTGGTGGCCCAGGTTCAGGCAGCGGCTTTGCTGGTGGATATGGAGACATAGGCAGCAGTGGTCAATTGGATGGCAAAGACAGCGACAAAATAGGTCAGAATGTTGGAGATTTTGGGACAACAGAGGAAAACTTCCGGGACCACGATGATGATGCTGGTAATTTTGCCAAAAGAGCTTGA 1326 0.4857 MRSVHTPIETLRSSGSSQIKGMAFFSRVGNILRQAANKQLSWELRSTPSIFQAIRCMSSAANSRVFVGGLSYSTDEQSLREAFEKYGQVVDARVIMDRDSGRSRGFAFVTFTSVEEASSAIQALDGQDLHGRQVRVNYANERPRYGGGGFGGSYGNAPYGAGAGAGYGGGYGSPPYGGSGAYGGNTGGGYGGGGYGGGSYGPSGDFGGSTSNNYASNNFGAGAAGGSFGNDGNFASGSPYGGGYGGNSGSGAAADSFGTGSSGGGFGTRSAGGGFGSTNYANDGNIASGSTYTGGSSGGFVGDSGSFASGSTYAGGNSGNSSVSGGVGGDDYGSASSFGGAAASGGSDSFGSASGFGSSGNFGSSVGFGSSGNFGSSADFGSSGGPGSGSGFAGGYGDIGSSGQLDGKDSDKIGQNVGDFGTTEENFRDHDDDAGNFAKRA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0790 441 Gene3D - 23 157 IPR012677 -
Acco13g0790 441 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 23 223 - -
Acco13g0790 441 MobiDBLite consensus disorder prediction 377 441 - -
Acco13g0790 441 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 65 135 IPR000504 GO:0003723
Acco13g0790 441 CDD RRM2_NsCP33_like 64 139 - -
Acco13g0790 441 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 63 141 IPR000504 GO:0003723
Acco13g0790 441 SMART rrm1_1 64 137 IPR000504 GO:0003723
Acco13g0790 441 MobiDBLite consensus disorder prediction 423 441 - -
Acco13g0790 441 SUPERFAMILY RNA-binding domain, RBD 62 170 IPR035979 GO:0003676
Acco13g0790 441 SMART rrm2_1 64 137 IPR003954 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0790 Acco-ChrAcco13 5887271 5889927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0790 61 143 C2H2 Transcription Factor Family AT2G19380 34.940 7.21e-11 62.4