Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0789 ATGTGCCCGTTTAAAGGGCTGTACTTAAGTGTTAATTCACTATTCTTTTTTGTCTGTCTTGTCTGTCCTCTTCGATTCCTGGAAAGTTCGTTAGTAAGGTACATGGTGACCCTTGCTCCTGGTTTGGATAGTTGTGTGACCTTTGAGATGAGAATGAAGATATCGAACGTATCCTGCACATTTCAAATCGTTGAGAACGTCCCAAACCGTGATATCACGAAGCTATTAATTAGAAATAGAAACCCTAACAAAAGCCCTGTTGATCCTCTCGATCATAGTCTCTCTCTCCCTTCGCCCGCCTTCCTCGCCAGCATGGCTGCCGCAGCTAGGCCTCTCGTCACCGTGCAAGCCCTTGAGGGCGATATGGCCACTGACGCACCCCCAACAGTTCCACTTCCTGATGTTATGAAGGCATCGATTAGACCCGATATTGTCACCTTCGTTCACTCCAATATTTCCAAGAACAGCCGGCAACCTTACGCCGTCAGCAAGCGCGCCGGCCACCAGACCTCCGCTGAGTCTTGGGGTACTGGCCGCGCGGTCTCTCGTATCCCTCGTGTACCCGGTGGTGGCACCCATCGCGCGGGGCAGGGTGCTTTCGGCAACATGTGTCGTGGTGGACGCATGTTCGCTCCTACCAAAACTTGGCGCCGCTGGCACCGTAGAGTTAATGTGACTCAGAAGCGTCACGCAGTCGTTTCGGCCATTGCTGCTTCGGCGGTTCCATCACTTGTTATGGCTCGCGGTCATCGGATTGAGTCCGTGCCGGAGGTGCCTCTGGTCGTGAGTGATTCAGCTGAGGGTGTTGAGAAAACTAAGGACGCAATCAAAGTTCTGAAGCAGGTTGGTGCTTTTCCTGATGCTGAGAAGGCAAAGGATAGCCACTCTATTCGACCAGGTAAGGGAAAGATGAGAAATCGCCGATATATTTCTCGCAAAGGTCCTCTTATTGTGTATGGAACTGAAGGAGCTAAAGCAGTGAAGACATTTAGGAACATACCTGGTGTTGAGGTTGCTAATGTGGAAAGGTTGAATCTGCTGAAGCTGGCTCCTGGTGGTCATCTTGGGAGATTTGTCATTTGGACTAAGTCGGCTTTTGAGAAGCTGGATTCTGTCTATGGATCGTTCGATAAACCATCAGAAAAGAAGAAGAGCTACCTGCTTCCGAGGTCTAAGATGGTCAATTCGGATTTATCAAGGATCATCAACTCTGATGAGATTCAGTCTGTCGTAAGGCCGATCAAGAAGGAAGTCAAGAGGGCACCACTGAAGAAGAACCCACTGAAGAACTTGAATGCTATGTTGAAGCTGAATCCATATCATAAGACGGCTAAGAGGATGGCTCTTCTTGCTGAAGCTCAGCGAGTGAAAGCAAAGAAGGAGAATCTCGATAAGAAGAGGAGTTCTGTTCCTAAGGAGGAGGCTTCTGCTATCAGGGCTGCAGGAAAGGCATGGTACCACACCATGATCTCTGACAGTGATTACACCGAATTTGAGACCTTTTCCAAATGGCTGGGCGTTTCCCAGTAA 1530 0.4928 MCPFKGLYLSVNSLFFFVCLVCPLRFLESSLVRYMVTLAPGLDSCVTFEMRMKISNVSCTFQIVENVPNRDITKLLIRNRNPNKSPVDPLDHSLSLPSPAFLASMAAAARPLVTVQALEGDMATDAPPTVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVTQKRHAVVSAIAASAVPSLVMARGHRIESVPEVPLVVSDSAEGVEKTKDAIKVLKQVGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKTFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSVYGSFDKPSEKKKSYLLPRSKMVNSDLSRIINSDEIQSVVRPIKKEVKRAPLKKNPLKNLNAMLKLNPYHKTAKRMALLAEAQRVKAKKENLDKKRSSVPKEEASAIRAAGKAWYHTMISDSDYTEFETFSKWLGVSQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0789 509 Gene3D - 107 412 IPR023574 GO:0003735|GO:0005840|GO:0006412
Acco13g0789 509 MobiDBLite consensus disorder prediction 158 177 - -
Acco13g0789 509 MobiDBLite consensus disorder prediction 158 200 - -
Acco13g0789 509 Coils Coil 446 466 - -
Acco13g0789 509 FunFam 60S ribosomal protein L4 107 412 - -
Acco13g0789 509 PANTHER 60S RIBOSOMAL PROTEIN L4 108 502 IPR045240 -
Acco13g0789 509 SUPERFAMILY Ribosomal protein L4 119 371 IPR023574 GO:0003735|GO:0005840|GO:0006412
Acco13g0789 509 Pfam 60S ribosomal protein L4 C-terminal domain 384 456 IPR025755 -
Acco13g0789 509 Pfam Ribosomal protein L4/L1 family 130 370 IPR002136 GO:0003735|GO:0005840|GO:0006412
Acco13g0789 509 ProSitePatterns Ribosomal protein L1e signature. 224 250 IPR013000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0789 Acco-ChrAcco13 5882323 5886935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0789 106 509 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.178 0.0 673