Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0770 ATGGAAGAAGAAGACGGTCGACAGGTGTTGAAACATGTGTGTAAATTCTGCAGCAAGAGCTTCCCTTGTGGCAGATCTTTAGGAGGTCACATGAGGTCACACATCACCAATAATAATGTTTCAGCTCAAGAAGCAGAGGACAATAATACACTCACGACGGCGACGAAGAAGAAGATTCAATGCGACGTCATCAATGGCGGAGCTGGCGGAAGCAGCAGTAAGGTCGTCGGAGAGTACGATCTCAGAGAGAATCCCAAAAAGACTTGGAGATTCACAGATTCAAGAAGCAAAGAAGAAGAAACAACACCACTACTGGTCACTGAGGACAAATTCTGCAAAGAGTGTGGTAAAGCGTTTCACTCTTGGAAAGCTCTGTTTGGTCACATGAAATGCCATTCTGAGAAATCTTCCATTAACAACAACAGCTTGGAGAATCGAGATTCTGTTGCTGCTGGCCATAAAGTCGTTACTGATAGCCAATCAGACAACGAAGGAACTGGCAATAATAATAATAATAATCCCAGCCGAAGAAGAAGATCCAAGAGAAGAAGAACCAGGTTTGTGATGACCCCTGCTTCAACTTCGTCTCTGTCTTTTGTAAATAATCATGCTTCGTCCTCTATTTCTGAGGTTGAACAAGAGCAAGAAGAGGTTGCTATGAGCTTAATGATGCTAAGTAGGGACGTGGGTCATTGGGGTGGTTTGAATTCTCTTGTTGAGTCCTCTGATAACAATTCTGCTTACTTTGAAGCTCGATCTTATGTGGTTCCAACTAATCTGAGCACCAAAATTGAAACAGCTAAAGGGAAGAAACCAGTGAACTTAGCAATAGTTTCCATTAATAAAACAGAACTAGACTCATCAGTGAAGTCAAATTGCAAGAAAGGCAAGTTCAAGTGTACTACTTGCAACAAGATCTTTCATTCATACCAAGCTCTGGGAGGCCATAGATCTAGTCATAAGAAGCTCAAAGGAGGCTGCTCTGCTTCTAGAAACGATCAGAGCAGTGAAAACAGCATAGAAACAGACCTCAACAATGGGTATTATGTGGTCGAAAAGCAACATCAAGAGCTTACTGGTTCTGTCAATTTTGAGAACGAGGAAGAGATGGTTAAGAAGAACAAAGTACATGAGTGTCCATTTTGCCTCAAGATTTTTCCAACTGGGCAAGCTTTGGGTGGCCACAAGAGATCTCATTTTGCTGCAGAAGGTTCACTAGTACTTGAGAAACCAGTTCAGGAAATCAGAGACTTTCTTGATCTTAATCTTCCAGCTTCTGCAGAAGAAGAAAGTAACAGTCAAGTAATGGAGAATTACCCACCATGGTGGCTGGTACAAGGCCATAATCATCATCATCATCCAAAGCAGGAGCCACTGGTTGGTCTCATATCTAACTGA 1398 0.4227 MEEEDGRQVLKHVCKFCSKSFPCGRSLGGHMRSHITNNNVSAQEAEDNNTLTTATKKKIQCDVINGGAGGSSSKVVGEYDLRENPKKTWRFTDSRSKEEETTPLLVTEDKFCKECGKAFHSWKALFGHMKCHSEKSSINNNSLENRDSVAAGHKVVTDSQSDNEGTGNNNNNNPSRRRRSKRRRTRFVMTPASTSSLSFVNNHASSSISEVEQEQEEVAMSLMMLSRDVGHWGGLNSLVESSDNNSAYFEARSYVVPTNLSTKIETAKGKKPVNLAIVSINKTELDSSVKSNCKKGKFKCTTCNKIFHSYQALGGHRSSHKKLKGGCSASRNDQSSENSIETDLNNGYYVVEKQHQELTGSVNFENEEEMVKKNKVHECPFCLKIFPTGQALGGHKRSHFAAEGSLVLEKPVQEIRDFLDLNLPASAEEESNSQVMENYPPWWLVQGHNHHHHPKQEPLVGLISN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0770 465 ProSiteProfiles Zinc finger C2H2 type domain profile. 12 39 IPR013087 -
Acco13g0770 465 ProSitePatterns Zinc finger C2H2 type domain signature. 379 399 IPR013087 -
Acco13g0770 465 SUPERFAMILY beta-beta-alpha zinc fingers 298 399 IPR036236 -
Acco13g0770 465 SUPERFAMILY beta-beta-alpha zinc fingers 12 132 IPR036236 -
Acco13g0770 465 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
Acco13g0770 465 MobiDBLite consensus disorder prediction 156 174 - -
Acco13g0770 465 ProSitePatterns Zinc finger C2H2 type domain signature. 300 320 IPR013087 -
Acco13g0770 465 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 443 - -
Acco13g0770 465 Pfam C2H2-type zinc finger 298 322 - -
Acco13g0770 465 Pfam C2H2-type zinc finger 112 134 - -
Acco13g0770 465 Pfam C2H2-type zinc finger 376 399 - -
Acco13g0770 465 Pfam C2H2-type zinc finger 12 34 - -
Acco13g0770 465 Gene3D Classic Zinc Finger 295 399 - -
Acco13g0770 465 ProSiteProfiles Zinc finger C2H2 type domain profile. 377 404 IPR013087 -
Acco13g0770 465 SMART c2h2final6 377 399 IPR013087 -
Acco13g0770 465 SMART c2h2final6 298 320 IPR013087 -
Acco13g0770 465 SMART c2h2final6 110 132 IPR013087 -
Acco13g0770 465 SMART c2h2final6 12 34 IPR013087 -
Acco13g0770 465 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Acco13g0770 465 ProSitePatterns Zinc finger C2H2 type domain signature. 14 34 IPR013087 -
Acco13g0770 465 ProSiteProfiles Zinc finger C2H2 type domain profile. 298 325 IPR013087 -
Acco13g0770 465 MobiDBLite consensus disorder prediction 156 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0770 Acco-ChrAcco13 5743387 5744784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0770 372 429 C2H2 Transcription Factor Family AT1G26610 51.613 9.45e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco13g0770 zf-C2H2_6 1.8e-09 CL0361