Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0769 ATGCAGCCTCCGTCCCACACTACCCTCTTCTCCCATAAACCCTATCCTTCAGAATCATTCTTCTTAACCTTTCCTCAAACGACGATTCACTCCCTGCAATCGGATTCCCCTCTTTACACTCATGGATCCGACCCGCTGGGAAGTTCTGCCTCGTCCGCATTGCTGCACTCTGCTTATGGGGGTCAATCAATTAATTCTATGGACACGAACGTGGATTCTCAGAACTGGATCGTCAAACAAGTTCCCTCCATGAGATACGAAGCTGCTGCCAAAGCACCTCTTGGGACTTCGGCTGTGTCTGCAGATTTTCCTTCTGTGTGGAATGGCATCTGGGTGCCTCAACTTTTGCCTAGTCTTACCCCAGTAATATTGCCAATGCCAAACCAAACCAAAGCTAATGAACCAATGAGATGCGAGGTTTGCAAAATTGACTGCCCCAGCAAAGATGTTTTTGAAAAGCACGTATCAGAAGAGAAGCACAAGAGGAATATGCAGTTGCTAAATAACCCCACCAATACAATAATACCAGGAGCCTCTCGTGCAAGTTTAGAGAGTCAAATAAGTAGGATGGGAGGACAAGATTTATTTGGTGCAGTGAGCAAAGAGTTAGAGTCTAAGAAACAGAAGCTTGTGAAGGGCGGTGCAGCATTTGATTCAGTAAGGGTTTGCACGATATGTAACGTCGCTTGCAATGGTCAAGATGTATATAACAAACATCTATCTGGGAAGAAGCATACTGCTCAGGTTAGCTTGATTTCTGATAATGGGATCGGTCCTTATATTGCTGCTTTCAAGGCTCGTGGCATTGGTCCTTGGAAAAAAAGCCCAAAGAAAACTAAGTTTACCCAACCTGCATGGTGTGAACTCTGCAAGATCAGTTGTACCAGCAGGGATGCATATCTGACACACATCGCTGGGAAGAAACACATGAGAAACTTGGAGTTGCTGTCAAAATCAGATAATCATTTGCAACTTCAAATCAATCCAGTTATTGGTCCCCATGAAAAGCCAAACACTTGTAAAGATGAAGGGATAGTTTCACATATGCCAAATAAAGCAGCCATGGTAGAGGATATTGAGGCAAAGAAACGTAAACTTGTGGAAGGTGGAGTAGCAGAAACTGATATTAGAATATGCACTCTTTGTAATGTGGTGTGCAACAGCCAAACAGTGTTTCATTTTCACCTTACTGGGCAGAAACATGCTGACATGGTGAAGCTGAAGCAAGAGCAGGTAGGGTCAAGTTAA 1248 0.4399 MQPPSHTTLFSHKPYPSESFFLTFPQTTIHSLQSDSPLYTHGSDPLGSSASSALLHSAYGGQSINSMDTNVDSQNWIVKQVPSMRYEAAAKAPLGTSAVSADFPSVWNGIWVPQLLPSLTPVILPMPNQTKANEPMRCEVCKIDCPSKDVFEKHVSEEKHKRNMQLLNNPTNTIIPGASRASLESQISRMGGQDLFGAVSKELESKKQKLVKGGAAFDSVRVCTICNVACNGQDVYNKHLSGKKHTAQVSLISDNGIGPYIAAFKARGIGPWKKSPKKTKFTQPAWCELCKISCTSRDAYLTHIAGKKHMRNLELLSKSDNHLQLQINPVIGPHEKPNTCKDEGIVSHMPNKAAMVEDIEAKKRKLVEGGVAETDIRICTLCNVVCNSQTVFHFHLTGQKHADMVKLKQEQVGSS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0769 415 SMART ZnF_U1_5 218 252 IPR003604 GO:0003676|GO:0008270
Acco13g0769 415 SMART ZnF_U1_5 374 408 IPR003604 GO:0003676|GO:0008270
Acco13g0769 415 SMART ZnF_U1_5 282 316 IPR003604 GO:0003676|GO:0008270
Acco13g0769 415 SMART ZnF_U1_5 133 167 IPR003604 GO:0003676|GO:0008270
Acco13g0769 415 SUPERFAMILY beta-beta-alpha zinc fingers 217 251 IPR036236 -
Acco13g0769 415 SUPERFAMILY beta-beta-alpha zinc fingers 375 408 IPR036236 -
Acco13g0769 415 SMART c2h2final6 136 160 IPR013087 -
Acco13g0769 415 SMART c2h2final6 285 309 IPR013087 -
Acco13g0769 415 SMART c2h2final6 221 245 IPR013087 -
Acco13g0769 415 SMART c2h2final6 377 401 IPR013087 -
Acco13g0769 415 SUPERFAMILY beta-beta-alpha zinc fingers 114 167 IPR036236 -
Acco13g0769 415 Pfam Zinc-finger of C2H2 type 223 245 - -
Acco13g0769 415 Pfam Zinc-finger of C2H2 type 138 155 - -
Acco13g0769 415 Pfam Zinc-finger of C2H2 type 379 401 - -
Acco13g0769 415 Pfam Zinc-finger of C2H2 type 286 309 - -
Acco13g0769 415 Gene3D Classic Zinc Finger 359 410 - -
Acco13g0769 415 Gene3D Classic Zinc Finger 272 315 - -
Acco13g0769 415 Gene3D Classic Zinc Finger 199 251 - -
Acco13g0769 415 Gene3D Classic Zinc Finger 125 166 - -
Acco13g0769 415 SUPERFAMILY beta-beta-alpha zinc fingers 279 316 IPR036236 -
Acco13g0769 415 PANTHER ZINC FINGER PROTEIN 385B-LIKE 274 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0769 Acco-ChrAcco13 5733090 5735811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0769 134 411 C2H2 Transcription Factor Family AT5G61190 24.101 1.24e-13 71.2