Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0755 ATGGTTTCCAAATCATCTACGAAACTCACGAGTTCATCCACCCAACAGCAAATTGATCGCCCGCTTCAAAGTCTACGCATTCGGGTCAAAATCCTTCGTGTTTCTAATCTTCACCGAACCGGTCAGCAACGGCGGCTTGGCCTCATGCCTCCACCGCCCACTTCTTCTTCCTTCCCTCATGTAACAGATTCCTGGGGCTTACTATTAATCTGTTCCTTGATCCTTTTCTCAGCGGGGAAGATAGTTGTTGCCGGAGATTCTCTGGACACAGACAGAGAAGTTTTGCTTCAGCTTAAATTATACCTCAACAATCAAACTCTTGTAGACCAGGGGCAATACACAATCTGGAACACGACCAGTTCGAATCCCTGTGACTGGTTGGGAATCAGGTGTAGCGGCAATGAAACAACAACGAGGAGGGTGGTCGGAGTTGACCTCTCCGACAACAAAATCACCGGCAAGATATTCCAGAACTTCTCTAACCTCACTCAGCTCACATACCTTGACCTTTCCCGTAACACACTCTCCGGCGAGATTCCGGCGGACTTAAGGCGGTGCCAAAGGCTCAAGTATCTGAACCTCTCCTACAATATTCTTCCTGAAGAGTTGAATTTAATTGGCTTGACAAACTTACAAATTCTTGACTTATCAGGCAACAGGCTTTATGGAGATCTTGGGTTTAATTTCCCTGCCATTTGTGACAATCTGATTAGTTTGAATATCTCAGGGAATAATTTCACTGGGAGGATTGATGAGTGCTTCGATCAGTGTTTGAAATTGGAGCACTTGGATTTGAGCACTAATAAGCTAAGTGGGGATATATGGATGGGAATTGCAAAGCTGAGAACTTTTTCTGTTTCAGAGAATTTTCTCAGTGGGAAAATTCTTCCATCAATTTTTCCAGTGAACTGCAATCTTGAAGTTCTCGACATTTCAGAAAATATGTTCACAGGGAATGTGCCTAAGGAGGTCGCTAACTGCAAGAATTTAGCGATACTGAATCTCTCTAGCAACAAATTCAATGGATCAATACCTAAAGAAATTGGTTCCATTTCTGGGATGGAAGCATTGTACTTGGGGAATAATAGTTTCTCAAGAGACATCCCAGAAGAACTCTTGAACTTGACCAATTTGGTATTCTTGGACTTAACTAGAAACAAATTTGGTGGGGACATACAAGAGATATTTGGGAAATTCAAGCAGGTTAAGTATCTTCTGTTACACTCAAATTCTTACACTGGAGGGTTATCTTCATCAGGAATTCTCAAACTACCAAGCATTTTACGCTTGGACCTAAGTTACAACAACTTTTCAGGTGCATTACCCACAGAAATGTCTCAAATGTCAAGCCTCAAGTTATTAATGTTAGCCTACAATCAATTCAATGGACCTATTCCATCTGAATTTGGAAACTTGCCTCACCTTCAAGCTCTTGACCTATCATCCAACAACTTATATGGGCCAATCCCACCAACTCTTGGAAACTTGACCTCTCTTTTATGGCTCATGCTTGCAAACAATTCATTAACAGGTGAAATCCCAAGAGAGTTGGGAAATTGTTCGAGCTTATTATGGCTAAACCTTGCAAATAACAAACTCACAGGAAAATTCCCCCCTGAATTGGCCAATATAGGAAGAAACGCTATGGTCACATTTGAATCAAATAGACAATATGACACAGTCAGTGCTGGCTCTGGTGAGTGCTTAGCCATGAAGAGATGGATTCCTGCAGATTACCCTCCATTTAGTTTTGTTTATGACATCCTTACAAGAAAGAATTGCAGAAGCATTTGGGACAGATTGCTTAAAGGGCATGGGATTTTTGCGATTTGTAGTGCTGGTTCATTTTCAACAACGTCTCAGATCTCTGGGTATGTTCAGCTAAGTGGGAACCAATTCTCAGGTGAAATCCCTACGGAGATTGGAAAGATGCAGAATTTGAGCATGTTGCATTTAGGGTTCAATAAATTTTCTGGGAAATTACCTGCGGAGGTGAAAAGTATTCCGCTTGTGGTGTTCAACTTAACAAGAAATGAGTTTTCTGGGCAAATCCCTTGGGAAATTGGAACCATGAAGTTCTTAATGAATCTTGATCTCTCTTACAACAATTTTTCTGGGGTTTTCCCTCCAAGTTTGGGAAACTTAACAGAGCTCACAAAGTTCAACATTTCTTATAATCCCTTTATTTCAGGTGAGATTCCATCAACAGGACAACTAGCTACGTTCGAGAAATACTCATATTTGGGAGATCCCCTCTTGCATCTCCCACCTTTCATCGACAACTCCACCGATGACCAAAAAAACACTACTTTTCGTAACAGAGCCATAAAAAAATCCACGAATGTCTCTGTTTTCCTGGTGATATTTGCTCTCATTCTTGCTTTCTTAGTATTTGGTCTTCTTACTGTCATTGTCTGTCTACTGATAAAATCCCCATCGGAAGAACCATTCCTGAGAGGCATAAAAATCGACCATGAATCTGGAACGTCGTCCCCATGGTTGTCGGACACGGTTAAGGTTATTCGATTGGACAGGACAGCTTTCACACACGCTGATATCTTGAAAGCCACAGGGAACTTCTCAGACGACAGAATCATAGGCAAAGGAGGGTTTGGAACAGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAGCTTCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAAGTTCTTAGTGGCCATGGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCCACGGTTCAGAAAAACTATTAGTTTACGAATACATTTCAGGTGGGAGCTTAGAAGATCTTGTAACTGACAGAACAAGATTCACTTGGAAACGACGGCTAGAAGTAGCCATTGATGTTGCTCGAGCTTTGGTTTACTTACACCATGAATGTTACCTTCCAATTGTTCACAGAGATGTGAAGGCAAGCAATGTGTTGTTGGACAAGAAAACAGGGAAGGCTAAAGTTACAGACTTTGGACTGGCCAGAGTGGTTGATGTCGGAGACAGCCACGTCAGCACGATGGTGGCCGGGACGGTGGGGTATGTGGCGCCGGAGTATGGGCACACGTGGAAGGCGACGACAAAAGGGGATGTGTATAGTTATGGGGTATTGGCTATGGAGTTGGCGACTGGAAGAAGAGCATTGGATGGAGGGGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTGATGGGTCATGGAAGGAATAGGCCAATCGGCCGGCCGGTGATTCCGGTGGTGCTGATGGGTTCTGGTCTGGTTGAAGGTATGGAGGAGATGGTGGAGCTGTTAAGGATAGGGGTGAGGTGCACGGCGGAGACCCCGCAGGCTAGACCGACAATGAAGGAGGTTCTGGATACGCTGATCAAGGTGTATAACTCCAAGGATGATTCAAGCTATGAACATTCGAGCATCCGCTTGGATCATAATTTACAGGGTATAAAATAA 3489 0.4351 MVSKSSTKLTSSSTQQQIDRPLQSLRIRVKILRVSNLHRTGQQRRLGLMPPPPTSSSFPHVTDSWGLLLICSLILFSAGKIVVAGDSLDTDREVLLQLKLYLNNQTLVDQGQYTIWNTTSSNPCDWLGIRCSGNETTTRRVVGVDLSDNKITGKIFQNFSNLTQLTYLDLSRNTLSGEIPADLRRCQRLKYLNLSYNILPEELNLIGLTNLQILDLSGNRLYGDLGFNFPAICDNLISLNISGNNFTGRIDECFDQCLKLEHLDLSTNKLSGDIWMGIAKLRTFSVSENFLSGKILPSIFPVNCNLEVLDISENMFTGNVPKEVANCKNLAILNLSSNKFNGSIPKEIGSISGMEALYLGNNSFSRDIPEELLNLTNLVFLDLTRNKFGGDIQEIFGKFKQVKYLLLHSNSYTGGLSSSGILKLPSILRLDLSYNNFSGALPTEMSQMSSLKLLMLAYNQFNGPIPSEFGNLPHLQALDLSSNNLYGPIPPTLGNLTSLLWLMLANNSLTGEIPRELGNCSSLLWLNLANNKLTGKFPPELANIGRNAMVTFESNRQYDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRSIWDRLLKGHGIFAICSAGSFSTTSQISGYVQLSGNQFSGEIPTEIGKMQNLSMLHLGFNKFSGKLPAEVKSIPLVVFNLTRNEFSGQIPWEIGTMKFLMNLDLSYNNFSGVFPPSLGNLTELTKFNISYNPFISGEIPSTGQLATFEKYSYLGDPLLHLPPFIDNSTDDQKNTTFRNRAIKKSTNVSVFLVIFALILAFLVFGLLTVIVCLLIKSPSEEPFLRGIKIDHESGTSSPWLSDTVKVIRLDRTAFTHADILKATGNFSDDRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHGFGWPHPNLVTLYGWCLHGSEKLLVYEYISGGSLEDLVTDRTRFTWKRRLEVAIDVARALVYLHHECYLPIVHRDVKASNVLLDKKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMGHGRNRPIGRPVIPVVLMGSGLVEGMEEMVELLRIGVRCTAETPQARPTMKEVLDTLIKVYNSKDDSSYEHSSIRLDHNLQGIK 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0755 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 982 994 IPR008271 GO:0004672|GO:0006468
Acco13g0755 1162 SUPERFAMILY RNI-like 139 345 - -
Acco13g0755 1162 ProSitePatterns Protein kinases ATP-binding region signature. 866 889 IPR017441 GO:0005524
Acco13g0755 1162 SMART serkin_6 860 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0755 1162 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 281 1130 - -
Acco13g0755 1162 SUPERFAMILY Protein kinase-like (PK-like) 844 1135 IPR011009 -
Acco13g0755 1162 SMART LRR_typ_2 472 495 IPR003591 -
Acco13g0755 1162 SMART LRR_typ_2 162 186 IPR003591 -
Acco13g0755 1162 SMART LRR_typ_2 644 675 IPR003591 -
Acco13g0755 1162 SMART LRR_typ_2 208 239 IPR003591 -
Acco13g0755 1162 SMART LRR_typ_2 424 448 IPR003591 -
Acco13g0755 1162 SMART LRR_typ_2 351 375 IPR003591 -
Acco13g0755 1162 SMART LRR_typ_2 496 520 IPR003591 -
Acco13g0755 1162 Gene3D Phosphorylase Kinase; domain 1 827 939 - -
Acco13g0755 1162 Gene3D Ribonuclease Inhibitor 615 771 IPR032675 -
Acco13g0755 1162 ProSiteProfiles Leucine-rich repeat profile. 188 209 IPR001611 GO:0005515
Acco13g0755 1162 Gene3D Ribonuclease Inhibitor 400 469 IPR032675 -
Acco13g0755 1162 ProSiteProfiles Protein kinase domain profile. 860 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0755 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 297 392 - -
Acco13g0755 1162 Gene3D Ribonuclease Inhibitor 470 566 IPR032675 -
Acco13g0755 1162 Gene3D Ribonuclease Inhibitor 290 395 IPR032675 -
Acco13g0755 1162 Gene3D Ribonuclease Inhibitor 87 229 IPR032675 -
Acco13g0755 1162 Pfam Protein kinase domain 861 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0755 1162 Gene3D Ribonuclease Inhibitor 230 289 IPR032675 -
Acco13g0755 1162 SUPERFAMILY L domain-like 280 539 - -
Acco13g0755 1162 Pfam Leucine Rich repeat 472 485 IPR001611 GO:0005515
Acco13g0755 1162 FunFam Putative LRR receptor-like serine/threonine-protein kinase 399 560 - -
Acco13g0755 1162 Pfam Leucine Rich Repeat 235 257 IPR001611 GO:0005515
Acco13g0755 1162 FunFam serine/threonine-protein kinase BRI1-like 2 822 939 - -
Acco13g0755 1162 Pfam Leucine rich repeat N-terminal domain 89 132 IPR013210 -
Acco13g0755 1162 SUPERFAMILY L domain-like 627 753 - -
Acco13g0755 1162 Pfam Leucine rich repeat 144 197 IPR001611 GO:0005515
Acco13g0755 1162 PRINTS Leucine-rich repeat signature 208 221 - -
Acco13g0755 1162 PRINTS Leucine-rich repeat signature 165 178 - -
Acco13g0755 1162 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 940 1143 - -
Acco13g0755 1162 Gene3D Transferase(Phosphotransferase) domain 1 940 1157 - -
Acco13g0755 1162 CDD STKc_IRAK 866 1137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0755 Acco-ChrAcco13 5625977 5630310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0755 105 1132 Receptor kinase-like Gene Family AT4G39400 33.422 8.20e-147 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Acco13g0755 Pkinase 2.7e-44 CL0016