Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0752 ATGGGTTGTGTCAACTCGAGGCAAACGGTGTCGGTGACGCCGGCGGTGGATCACTCCGATCTGTTCCAGGGCAATGTGAGTTTGGGACATTCAGGAAGAAGCTTGAGCGAGATAGATGGTAAGAAAAAGAAGAAGAAGAAGAGTGAGTCAGTGGGCGAGTCAGAGAGAGAGAGTTCAAATTGGGGATGTGATGAATCTTTGAGCTTCAGATTGGGGAATCTGCAGAAATATGTAGAAGGAGAGCAAGTCGCCGCCGGCTGGCCGGCATGGCTCACTGCCGTCGCCAGCGAAGCCATCCACGGCTGGGTGCCCCTCCGAGCCGACGCGTTTGAGAAGCTCGAGAAGGTTGTTAATGTTATGGTTACTGGGAAGATAGTAGCACTGAAGAAGGTGAGGTTTGATATTTTTGAACCAGAAAGTGTGAGATTTATGGCACGAGAAATAATGATTCTGAGAAGGCTTGATCATCCAAACATCATTAAATTGGAGGGTTTGATTACTTCTAAGTTGTCTTCTAGCATATACCTTGTGTTTGAGTACATGGAACATGACATTACAGGGCTCTTGTCCAGCCCTGATATCAGATTTAGTGAATCACAGATAAAATGTTACATGAAACAGCTGTTGTCTGGGCTTGATCATTGTCATTCGCGCGGTGTAATGCATAGAGATATAAAAGGATCGAATCTTCTGGTGAACAATGAAGGGATACTGAAGGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAACAGCCCCTCACCAGCCGTGTCGTCACTCTGTGGTACCGTCCTCCTGAGCTTTTGTTGGGTTCTACAGATTATGGTCCCTCGGTGGATCTATGGAGTGTTGGCTGTGTATTTGCAGAACTTCTTTTTAGAAAGCCAATTCTTCAGGGCAGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTTAAGCCACAACAAACATACAATAGTTGCCTCCAAGAGACCTTCAAAGACTTCCACATAACTATTGTGAATCTCCTTCAAACTCTCCTTTCCATTGAATCATACAAGCGTGGAACTGCTTCATCTGCTCTTTCATCAGAGTATTTCAAGACAAAGCCTTATGCATGTCACCCGTCAAGCTTGCCTGTATACTCACCTAGCAAGGAGATTGATGTAAAACACTGGGAGGAGTCAAGAAGAAAAAAGATTGGTGGAAGAGCTCGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCACCAGGAATCAGTAAACTAGCCCCAGCAGAGATTAATCTCTTGTTACAGAGTTTGGTTAATCAGACTCGAAACTGCCAAGTGGTGAATTGTAGAACTTCCTTCATCCTAAAAGAGAACACCAATATAGGTGAGGAGGTTGCAAAACCATCAACTGATAGTGATAGAGCAGAACAAGATGCTTCTTCCCATGTTAAGAATCCATCTCATGGAGATATTCCCATACTACAAGTTTCAACTTCAAGTGGCTTTGCGTGGGCGAAAAGGCGTAAAGATGATGTTTCGAGAAGATCTCATTGCAGATCCATTTCAAGGGGACATATTTTGAATTCTTCAGAACATTCTTCCCCACATTCAAGAAACAACTTTGATTCAAGAAACCAGGAAAATAAGGAATTTTGTGGAGGAAGATCCAACTCAAGGGGTCATAATGACATACGCGAAATCTCTAAGTTTGCCATGTTAGATAAAATGAATGATCTAATCATGCTTAGTCACCGAATAAACAATTAG 1812 0.4316 MGCVNSRQTVSVTPAVDHSDLFQGNVSLGHSGRSLSEIDGKKKKKKKSESVGESERESSNWGCDESLSFRLGNLQKYVEGEQVAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKVVNVMVTGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSSSIYLVFEYMEHDITGLLSSPDIRFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLFRKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFKPQQTYNSCLQETFKDFHITIVNLLQTLLSIESYKRGTASSALSSEYFKTKPYACHPSSLPVYSPSKEIDVKHWEESRRKKIGGRARGPETRKPSRKPPGISKLAPAEINLLLQSLVNQTRNCQVVNCRTSFILKENTNIGEEVAKPSTDSDRAEQDASSHVKNPSHGDIPILQVSTSSGFAWAKRRKDDVSRRSHCRSISRGHILNSSEHSSPHSRNNFDSRNQENKEFCGGRSNSRGHNDIREISKFAMLDKMNDLIMLSHRINN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0752 603 MobiDBLite consensus disorder prediction 35 60 - -
Acco13g0752 603 PANTHER CELL DIVISION PROTEIN KINASE 121 388 - -
Acco13g0752 603 Gene3D Phosphorylase Kinase; domain 1 117 182 - -
Acco13g0752 603 Gene3D Transferase(Phosphotransferase) domain 1 183 422 - -
Acco13g0752 603 SUPERFAMILY Protein kinase-like (PK-like) 119 389 IPR011009 -
Acco13g0752 603 MobiDBLite consensus disorder prediction 482 498 - -
Acco13g0752 603 MobiDBLite consensus disorder prediction 410 433 - -
Acco13g0752 603 MobiDBLite consensus disorder prediction 410 438 - -
Acco13g0752 603 Pfam Protein kinase domain 118 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0752 603 SMART serkin_6 110 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0752 603 CDD STKc_CDK9_like 121 384 - -
Acco13g0752 603 ProSiteProfiles Protein kinase domain profile. 99 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0752 603 FunFam probable serine/threonine-protein kinase At1g54610 97 182 - -
Acco13g0752 603 MobiDBLite consensus disorder prediction 537 556 - -
Acco13g0752 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Acco13g0752 603 MobiDBLite consensus disorder prediction 479 507 - -
Acco13g0752 603 MobiDBLite consensus disorder prediction 522 576 - -
Acco13g0752 603 MobiDBLite consensus disorder prediction 33 62 - -
Acco13g0752 603 MobiDBLite consensus disorder prediction 557 576 - -
Acco13g0752 603 FunFam probable serine/threonine-protein kinase At1g54610 183 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0752 Acco-ChrAcco13 5591761 5595194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0752 102 416 Core Cell Cycle Gene Families AT5G10270 47.801 1.55e-99 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco13g0752 Pkinase 2.1e-59 CL0016