Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0745 ATGGAGACCGAGGAAATTAATTTGAACAAAGAATCTGTTCTTGGTGCGGGAAATAATAGTAAGAGTGGTGATGGATTCATTGATAGAAGCAAAGTCAGGATTTTGTTATGTGACAACGATGCCAAGAGTTCGGAAGAGGTGTTTACCCTTCTCTTGAATTGCTCTTATCAGGTTACTTCAGTGAGGTCAGCAAGACAGGTAATTGATGCATTGAACGCAGAAGGGCAAGATATTGATATCATACTTGCTGAAGTTGACCTCCCCATGAAGAAGGGCTTTAAGATGCTGAAGTACATTGCACGGGACAAGGAACTGTGCCGAATTCCTGTTATAATGATGTCGGCTCAGGATGAGGTCTCCATTGTTGTTAAGTGCTTAAAACTCGGAGCAGCTGACTATCTCGTGAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACCCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGCAGAGAAGAACATCTTGAACTATGACTTTGACCTGGTTGTATCAGATCCTAGCGACGCTAATACAAACAGTACCACCTTGTTCTCAGATGATACAGATGACAGGTCCAAGAGAAGCACTAATCCTGAGACAGGAATGCCTACTCAACAGGAACATGAGTCAACTGTTGCTGTTGCCTCTGCTGTTGTAGTTGTTGAGGAGCTTCCAAATGCTCAAGCATCAGAATATCGCCCTGAAGTGCCTAGAATTAGTGACCGTCGAACTGTTGTAGGAAATTTTTCGGCTGGTCCCAAGAAGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACATATGTCAAAGCAGCCACAATGAAGAGCAACTTCCAACCAGTCATTCATGTTGATCATAATGCTGCTGCACATTTAAGAATGGAAGAAGATACAGATCAAGCATGCACTCAACTAGGGGTTCATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAAGCCATTCACAGGATGACTTGCCCAGCAGTAATAGCATCCCGGATTCTTTCTCCATCGAAAGGTCTTCTACTCCTCCTGCATCAATGGAAACTTCACAGCAAAAGCACTTCATGGAAGAACCTTTACCTCAGGGTATGACCCATCCAAGAAATGGAATGCATAATTCTGAAGTTGAAGTATCCGGCATGCCTGGCCAACATCATTATCCATATTATATTTCAGGGGTTGTTAATCCCATTATGATGCCTTCATCAGCACAATTGTACCAGAAGAATCTCCAGGACCTGCAGGCCCATGCTGGTACAGCTATCATGGCACAATACAATCATCTTTCACAATGCCCTCCTCATACAACGGGTATGACATCTTTCCCATATTACCCAATGGGTTTATGCTTACAACCTGGACAGATGTCTACCGTTCATTCATGGCCATCATTTGGTGGTAGTTCAAGTACATCCGAAGTCAAAATAAGTAAAGTTGATAGAAGAGAAGCAGCGTTGATGAAGTTTAGGCAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAATAGGAAACGACTTGCTGAAAGACGGCCTCGGGTAAGAGGACAGTTTGTTAGAAAGTTGAATGGCGTAAATGTTGATCTTAATGGTCAACCTGCTTCCACCGACTATGATGAGGATGATGAAGAAGATGAAGAGGACAATGCAGCACGAGATTCCTCTCCCGAGGATGCTTGA 1707 0.4312 METEEINLNKESVLGAGNNSKSGDGFIDRSKVRILLCDNDAKSSEEVFTLLLNCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGFKMLKYIARDKELCRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYDFDLVVSDPSDANTNSTTLFSDDTDDRSKRSTNPETGMPTQQEHESTVAVASAVVVVEELPNAQASEYRPEVPRISDRRTVVGNFSAGPKKSELKIGESSAFFTYVKAATMKSNFQPVIHVDHNAAAHLRMEEDTDQACTQLGVHDLQIHENGETCESHSQDDLPSSNSIPDSFSIERSSTPPASMETSQQKHFMEEPLPQGMTHPRNGMHNSEVEVSGMPGQHHYPYYISGVVNPIMMPSSAQLYQKNLQDLQAHAGTAIMAQYNHLSQCPPHTTGMTSFPYYPMGLCLQPGQMSTVHSWPSFGGSSSTSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDEEDEEDNAARDSSPEDA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0745 568 Gene3D - 32 238 - -
Acco13g0745 568 FunFam Two-component response regulator-like APRR1 32 281 - -
Acco13g0745 568 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Acco13g0745 568 SUPERFAMILY CheY-like 28 157 IPR011006 -
Acco13g0745 568 Pfam CCT motif 488 530 IPR010402 GO:0005515
Acco13g0745 568 MobiDBLite consensus disorder prediction 321 358 - -
Acco13g0745 568 ProSiteProfiles CCT domain profile. 488 530 IPR010402 GO:0005515
Acco13g0745 568 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Acco13g0745 568 SMART REC_2 32 147 IPR001789 GO:0000160
Acco13g0745 568 MobiDBLite consensus disorder prediction 180 213 - -
Acco13g0745 568 MobiDBLite consensus disorder prediction 544 568 - -
Acco13g0745 568 MobiDBLite consensus disorder prediction 326 358 - -
Acco13g0745 568 MobiDBLite consensus disorder prediction 531 568 - -
Acco13g0745 568 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 301 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0745 Acco-ChrAcco13 5541330 5545697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0745 21 567 Response Regulator Gene Family AT5G61380 52.283 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Acco13g0745 Response_reg 3.9e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0745 13 5541330 5545697 Acco13g0745 13 5541330 5545697 ECH