Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0739 ATGGAAAACGTTGTGGGACTCTGTAAGGAAGAAGAGAAAATGAATTTGCCTCCGGGATTTCGGTTTCATCCGACTGATGAAGAGCTTATAAGTCATTACCTGTACAAGAAGGCCACTGATTCAAACTTCTCAGCTAGGGCCATCGGGGAGGTGGATTTGAACAGGTCTGAACCATGGGATTTGCCATGGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTCTTTTGCGTGAGAGACAGAAAATACCCAACTGGCTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAGAGAGATTTACAGAGGAAAATCTCTGGTTGGTATGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCACCCAAAGGAGAAAAAACAAACTGGGTCATGCACGAATACAGATTAGAGGGTAGATTCTCTGTCCACAACCTCCCCAAAACCGCAAAGAACGAGTGGGTGATTTGCAGGGTTTTTCAAAAAGGTTCAAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGTTAGATTCTCTGGGAAATGAATTGGGTTCTGGTTTACCTCCATTGACAGATTCGTCACCTTTCCCTGGCAATAAAACCAACCCTGTCACAGATCAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGCTCATCAGAGAAACAACCAAGGAGGGATCTTTGATTCCTACAGCAACAACTTCCCTAATTATGGTGTTTCTTCTTCGAAACCCCCCTCAGACACTACACTTCCCAGAATCGCACTTCCTGGTTCCTTATATTCCTCTCAACAACAACAACCACATCATCATCAAGCTCCTTCAAGTTTACCTTCGCCCAGTTCTATTTATGGCCTGCAAGACCAGACTTTGCTCAGAGCATTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAGCCCGAGAGAGACATGATCAGCGTGTCTCAAGAAACAGGTCTCACTACGGACATGAACCCGGAAATCTCCTCGGTTATGTCGAATCTCCATCAGCAGCAGCAACAGCAGCAACCAACTGCTTCATCTGCAGCAATGGACTATGAAGGTTTGTGGACTTACTGA 1104 0.4484 MENVVGLCKEEEKMNLPPGFRFHPTDEELISHYLYKKATDSNFSARAIGEVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDREIYRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGRFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSGLPPLTDSSPFPGNKTNPVTDQSAYVPCFSNPIDAHQRNNQGGIFDSYSNNFPNYGVSSSKPPSDTTLPRIALPGSLYSSQQQQPHHHQAPSSLPSPSSIYGLQDQTLLRALLENQESNRNNFKPERDMISVSQETGLTTDMNPEISSVMSNLHQQQQQQQPTASSAAMDYEGLWTY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0739 367 FunFam NAC domain-containing protein 100-like 25 170 - -
Acco13g0739 367 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Acco13g0739 367 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Acco13g0739 367 MobiDBLite consensus disorder prediction 190 209 - -
Acco13g0739 367 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Acco13g0739 367 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 324 - -
Acco13g0739 367 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Acco13g0739 367 MobiDBLite consensus disorder prediction 268 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0739 Acco-ChrAcco13 5468975 5470272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0739 14 367 NAC Transcription Factor Family AT5G07680 56.461 1.02e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco13g0739 NAM 4.2e-39 No_clan