Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0725 ATGAAGAACCAGAGTCAGCCACTCGTGAGATGGAACCCAAAGAATGATTTTGATGAAGTTCCATTCCCTCTCACGTACCAATTACCCTCACCTGAGTTATTAAGGTTGTATCTTTTTTCCAGCGGAAATTTAGGACTGGACTGGGTACCTTGGATGGAACCGGAACCTCTGTTTGAAACTCTGGCCATTGAACCAACACCGAGCGTGCAAGACTATGACTTTTACGACATTAAGAAGGGACCGGGGGTGTGGAATGAGATTGACCATGGGTTTGATTCAGATAAGGCTGTTTATGTTGAATGCAATAAGAATGGTGAACGTGGGAAGGAAGAGAGAGATCAAGTGAAACGATCATGCAGAGAAGAGACAAGTGGAAGCAGTACCAAGTTGTTGACGAGGAAGATTATTTCTCAGTACTTTTATATGCCAATCACACAGGCTGCCAAAGAGCTTAATGTGGGCCTCACGCTTTTGAAGAAAAGGTGCAGAGAATTGGGAATTAGAAGGTGGCCACATAGGAAACTGATGAGCCTTCAAACCTTGATAAACAACGTAAAGGAGCTAGGGAAAGAGGGGGGACAGGAAAGTGAAGAGAAACTGAGGAATGCGCTGAAGATATTGGCGGAGGAAAAGAAGATGATGGAGGAGATGCCTGATTTGCAGCTTGAGAATAACACAAAACGGCTCAGACAAGCTTGCTTCAAAGCCAACTACAAGAAAAGGAAGCTCGTGGGGTCTTCCATGGAGTCTGATGACAGTGATGAGTCTGCAAGGAATGAATATAATTATGAAGAGAAAGTACAAGTACAGGACGTCAAGCATATGTTGCCATCCGTCCCTCTCCATTTCACAACATAA 858 0.4417 MKNQSQPLVRWNPKNDFDEVPFPLTYQLPSPELLRLYLFSSGNLGLDWVPWMEPEPLFETLAIEPTPSVQDYDFYDIKKGPGVWNEIDHGFDSDKAVYVECNKNGERGKEERDQVKRSCREETSGSSTKLLTRKIISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVKELGKEGGQESEEKLRNALKILAEEKKMMEEMPDLQLENNTKRLRQACFKANYKKRKLVGSSMESDDSDESARNEYNYEEKVQVQDVKHMLPSVPLHFTT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0725 285 Pfam RWP-RK domain 131 178 IPR003035 -
Acco13g0725 285 ProSiteProfiles RWP-RK domain profile. 111 198 IPR003035 -
Acco13g0725 285 PANTHER PROTEIN RKD4 111 254 IPR044607 GO:0003700
Acco13g0725 285 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0725 Acco-ChrAcco13 5375488 5376699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0725 117 247 AtRKD Transcription Factor Family AT1G18790 67.669 4.78e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Acco13g0725 RWP-RK 2.4e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0725 13 5375488 5376699 Acco13g0725 13 5375488 5376699 ECH